Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.33□□□□□ -0.28
RPL28P46779 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RPL28P46779 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 BX842568.3-201ENST00000418104 571 ntBASIC13.33□□□□□ -0.28
RPL28P46779 AC096631.2-201ENST00000436136 790 ntBASIC13.33□□□□□ -0.28
RPL28P46779 PBX2P1-201ENST00000493219 1291 ntBASIC13.33□□□□□ -0.28
RPL28P46779 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC13.33□□□□□ -0.28
RPL28P46779 MIR4767-201ENST00000582827 78 ntBASIC13.33□□□□□ -0.28
RPL28P46779 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RPL28P46779 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RPL28P46779 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL28P46779 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RPL28P46779 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL28P46779 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.33□□□□□ -0.28
RPL28P46779 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RPL28P46779 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC13.32□□□□□ -0.28
RPL28P46779 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.32□□□□□ -0.28
RPL28P46779 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RPL28P46779 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.32□□□□□ -0.28
RPL28P46779 AC024257.2-201ENST00000549699 147 ntBASIC13.32□□□□□ -0.28
RPL28P46779 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.32□□□□□ -0.28
RPL28P46779 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
RPL28P46779 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.32□□□□□ -0.28
RPL28P46779 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.32□□□□□ -0.28
RPL28P46779 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RPL28P46779 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.31□□□□□ -0.28
RPL28P46779 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RPL28P46779 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 HCG11-201ENST00000411553 5696 ntBASIC13.31□□□□□ -0.28
RPL28P46779 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL28P46779 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 SLC47A1P1-202ENST00000449666 945 ntBASIC13.31□□□□□ -0.28
RPL28P46779 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
RPL28P46779 AC126544.1-201ENST00000580842 1059 ntBASIC13.31□□□□□ -0.28
RPL28P46779 AC233992.3-201ENST00000607491 485 ntBASIC13.31□□□□□ -0.28
RPL28P46779 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
RPL28P46779 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RPL28P46779 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.31□□□□□ -0.28
RPL28P46779 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
RPL28P46779 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RPL28P46779 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
RPL28P46779 AC005082.1-201ENST00000413042 2259 ntBASIC13.3□□□□□ -0.28
RPL28P46779 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RPL28P46779 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.3□□□□□ -0.28
RPL28P46779 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL28P46779 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RPL28P46779 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.3□□□□□ -0.28
RPL28P46779 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL28P46779 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RPL28P46779 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL28P46779 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.3□□□□□ -0.28
RPL28P46779 AC027682.1-201ENST00000562846 899 ntBASIC13.3□□□□□ -0.28
RPL28P46779 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL28P46779 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
RPL28P46779 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms