Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.06■□□□□ 0.96
MMP13P45452 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP13P45452 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP13P45452 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.06■□□□□ 0.96
MMP13P45452 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MMP13P45452 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MMP13P45452 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.05■□□□□ 0.96
MMP13P45452 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 AC092666.2-201ENST00000613287 246 ntBASIC21.05■□□□□ 0.96
MMP13P45452 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MMP13P45452 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.05■□□□□ 0.96
MMP13P45452 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP13P45452 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.04■□□□□ 0.96
MMP13P45452 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 AL512408.1-201ENST00000569378 2000 ntBASIC21.04■□□□□ 0.96
MMP13P45452 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
MMP13P45452 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MMP13P45452 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.04■□□□□ 0.96
MMP13P45452 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MMP13P45452 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 AC011484.1-201ENST00000377652 1995 ntBASIC21.03■□□□□ 0.96
MMP13P45452 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.03■□□□□ 0.96
MMP13P45452 AC116050.2-201ENST00000612102 1779 ntBASIC21.03■□□□□ 0.96
MMP13P45452 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP13P45452 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP13P45452 CNN2P6-201ENST00000439038 900 ntBASIC21.03■□□□□ 0.96
MMP13P45452 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.03■□□□□ 0.96
MMP13P45452 AC007322.4-201ENST00000509611 723 ntBASIC21.03■□□□□ 0.96
MMP13P45452 AC080038.1-201ENST00000611274 1154 ntBASIC21.03■□□□□ 0.96
MMP13P45452 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MMP13P45452 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
MMP13P45452 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
MMP13P45452 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP13P45452 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 SMG8-203ENST00000578922 2178 ntBASIC21.02■□□□□ 0.96
MMP13P45452 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
MMP13P45452 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.02■□□□□ 0.96
MMP13P45452 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.02■□□□□ 0.96
MMP13P45452 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
MMP13P45452 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
MMP13P45452 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MMP13P45452 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP13P45452 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP13P45452 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP13P45452 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
MMP13P45452 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MMP13P45452 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP13P45452 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP13P45452 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP13P45452 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.01■□□□□ 0.95
MMP13P45452 AL591742.1-201ENST00000604433 565 ntBASIC21.01■□□□□ 0.95
MMP13P45452 AC231657.2-201ENST00000624556 255 ntBASIC21.01■□□□□ 0.95
MMP13P45452 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP13P45452 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP13P45452 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP13P45452 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
MMP13P45452 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MMP13P45452 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.01■□□□□ 0.95
MMP13P45452 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MMP13P45452 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.01■□□□□ 0.95
MMP13P45452 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
MMP13P45452 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
MMP13P45452 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
MMP13P45452 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
MMP13P45452 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms