Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.22■□□□□ 0.99
SLC1A1P43005 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SLC1A1P43005 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC1A1P43005 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.22■□□□□ 0.99
SLC1A1P43005 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
SLC1A1P43005 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SLC1A1P43005 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 AC087633.2-202ENST00000565166 1439 ntBASIC21.21■□□□□ 0.99
SLC1A1P43005 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SLC1A1P43005 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SLC1A1P43005 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
SLC1A1P43005 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC1A1P43005 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.21■□□□□ 0.99
SLC1A1P43005 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A1P43005 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.21■□□□□ 0.99
SLC1A1P43005 MIR6821-201ENST00000617625 74 ntBASIC21.21■□□□□ 0.99
SLC1A1P43005 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
SLC1A1P43005 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A1P43005 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC1A1P43005 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
SLC1A1P43005 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC1A1P43005 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.21■□□□□ 0.99
SLC1A1P43005 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 AC007322.4-201ENST00000509611 723 ntBASIC21.2■□□□□ 0.98
SLC1A1P43005 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.2■□□□□ 0.98
SLC1A1P43005 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SLC1A1P43005 AL356652.1-201ENST00000615962 565 ntBASIC21.2■□□□□ 0.98
SLC1A1P43005 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC1A1P43005 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SLC1A1P43005 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC1A1P43005 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.19■□□□□ 0.98
SLC1A1P43005 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC1A1P43005 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.19■□□□□ 0.98
SLC1A1P43005 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SLC1A1P43005 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.19■□□□□ 0.98
SLC1A1P43005 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.19■□□□□ 0.98
SLC1A1P43005 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC1A1P43005 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A1P43005 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A1P43005 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A1P43005 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SLC1A1P43005 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SLC1A1P43005 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.18■□□□□ 0.98
SLC1A1P43005 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.18■□□□□ 0.98
SLC1A1P43005 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.18■□□□□ 0.98
SLC1A1P43005 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.18■□□□□ 0.98
SLC1A1P43005 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SLC1A1P43005 AC013268.1-206ENST00000638368 961 ntBASIC21.18■□□□□ 0.98
SLC1A1P43005 AC112229.1-201ENST00000639295 961 ntBASIC21.18■□□□□ 0.98
SLC1A1P43005 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SLC1A1P43005 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
SLC1A1P43005 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
SLC1A1P43005 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.17■□□□□ 0.98
SLC1A1P43005 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SLC1A1P43005 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms