Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC30.63■■■□□ 2.49
KDM5CP41229 AC010947.1-201ENST00000623454 693 ntBASIC30.63■■■□□ 2.49
KDM5CP41229 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC30.63■■■□□ 2.49
KDM5CP41229 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KDM5CP41229 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
KDM5CP41229 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
KDM5CP41229 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC30.63■■■□□ 2.49
KDM5CP41229 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.63■■■□□ 2.49
KDM5CP41229 AC012676.1-201ENST00000574705 1949 ntBASIC30.63■■■□□ 2.49
KDM5CP41229 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
KDM5CP41229 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.62■■■□□ 2.49
KDM5CP41229 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
KDM5CP41229 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC30.62■■■□□ 2.49
KDM5CP41229 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC30.62■■■□□ 2.49
KDM5CP41229 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC30.62■■■□□ 2.49
KDM5CP41229 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
KDM5CP41229 CYP2D8P-201ENST00000433633 1490 ntBASIC30.61■■■□□ 2.49
KDM5CP41229 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC30.61■■■□□ 2.49
KDM5CP41229 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 AC116562.2-201ENST00000507042 360 ntBASIC30.61■■■□□ 2.49
KDM5CP41229 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC30.61■■■□□ 2.49
KDM5CP41229 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
KDM5CP41229 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
KDM5CP41229 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 FITM1-202ENST00000559294 800 ntBASIC30.6■■■□□ 2.49
KDM5CP41229 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
KDM5CP41229 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC30.6■■■□□ 2.49
KDM5CP41229 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC30.6■■■□□ 2.49
KDM5CP41229 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC30.6■■■□□ 2.49
KDM5CP41229 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
KDM5CP41229 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC30.6■■■□□ 2.49
KDM5CP41229 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
KDM5CP41229 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
KDM5CP41229 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.59■■■□□ 2.49
KDM5CP41229 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
KDM5CP41229 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC30.59■■■□□ 2.49
KDM5CP41229 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
KDM5CP41229 LINC01568-207ENST00000641790 1380 ntBASIC30.59■■■□□ 2.49
KDM5CP41229 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 MIR1238-201ENST00000408483 83 ntBASIC30.58■■■□□ 2.49
KDM5CP41229 NIFKP9-201ENST00000419265 221 ntBASIC30.58■■■□□ 2.49
KDM5CP41229 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 DUX4L26-201ENST00000489078 1255 ntBASIC30.58■■■□□ 2.49
KDM5CP41229 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 LTBR-211ENST00000543190 785 ntTSL 3 BASIC30.58■■■□□ 2.49
KDM5CP41229 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
KDM5CP41229 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC30.58■■■□□ 2.49
KDM5CP41229 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
KDM5CP41229 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC30.57■■■□□ 2.48
KDM5CP41229 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
KDM5CP41229 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC30.57■■■□□ 2.48
KDM5CP41229 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC30.57■■■□□ 2.48
KDM5CP41229 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
KDM5CP41229 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
KDM5CP41229 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC30.56■■■□□ 2.48
KDM5CP41229 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC30.56■■■□□ 2.48
KDM5CP41229 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC30.56■■■□□ 2.48
KDM5CP41229 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
KDM5CP41229 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC30.56■■■□□ 2.48
KDM5CP41229 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
KDM5CP41229 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
KDM5CP41229 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KDM5CP41229 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC30.55■■■□□ 2.48
KDM5CP41229 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC30.55■■■□□ 2.48
KDM5CP41229 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KDM5CP41229 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
KDM5CP41229 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC30.55■■■□□ 2.48
KDM5CP41229 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC30.54■■■□□ 2.48
KDM5CP41229 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
KDM5CP41229 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms