Protein–RNA interactions for Protein: P40016

RPN3, 26S proteasome regulatory subunit RPN3, yeastyeast

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN3P40016 PCC1YKR095W-A 267 nt3.01□□□□□ -1.93
RPN3P40016 GRX8YLR364W 330 nt3.01□□□□□ -1.93
RPN3P40016 RGM1YMR182C 636 nt3.01□□□□□ -1.93
RPN3P40016 YMR321CYMR321C 318 nt3.01□□□□□ -1.93
RPN3P40016 YNL028WYNL028W 318 nt3.01□□□□□ -1.93
RPN3P40016 YOR015WYOR015W 360 nt3.01□□□□□ -1.93
RPN3P40016 PAN3YKL025C 2040 nt3.01□□□□□ -1.93
RPN3P40016 PRP39YML046W 1890 nt3.01□□□□□ -1.93
RPN3P40016 RAX2YLR084C 3663 nt3□□□□□ -1.93
RPN3P40016 MDM20YOL076W 2391 nt3□□□□□ -1.93
RPN3P40016 YDR426CYDR426C 378 nt3□□□□□ -1.93
RPN3P40016 YML007C-AYML007C-A 111 nt3□□□□□ -1.93
RPN3P40016 GUP1YGL084C 1683 nt3□□□□□ -1.93
RPN3P40016 TSC11YER093C 4293 nt3□□□□□ -1.93
RPN3P40016 BAS1YKR099W 2436 nt3□□□□□ -1.93
RPN3P40016 RRM3YHR031C 2172 nt3□□□□□ -1.93
RPN3P40016 SGD1YLR336C 2700 nt2.99□□□□□ -1.93
RPN3P40016 PRE4YFR050C 801 nt2.99□□□□□ -1.93
RPN3P40016 FPR1YNL135C 345 nt2.99□□□□□ -1.93
RPN3P40016 CSE2YNR010W 450 nt2.99□□□□□ -1.93
RPN3P40016 ROM1YGR070W 3468 nt2.99□□□□□ -1.93
RPN3P40016 PSY2YNL201C 2577 nt2.99□□□□□ -1.93
RPN3P40016 MSB2YGR014W 3921 nt2.99□□□□□ -1.93
RPN3P40016 NAB3YPL190C 2409 nt2.98□□□□□ -1.93
RPN3P40016 YLR120W-AYLR120W-A 102 nt2.98□□□□□ -1.93
RPN3P40016 ALK2YBL009W 2031 nt2.98□□□□□ -1.93
RPN3P40016 TOM1YDR457W 9807 nt2.98□□□□□ -1.93
RPN3P40016 RCY1YJL204C 2523 nt2.97□□□□□ -1.93
RPN3P40016 TOF2YKR010C 2316 nt2.97□□□□□ -1.93
RPN3P40016 UBP14YBR058C 2346 nt2.97□□□□□ -1.93
RPN3P40016 ECM29YHL030W 5607 nt2.97□□□□□ -1.93
RPN3P40016 SEC7YDR170C 6030 nt2.97□□□□□ -1.93
RPN3P40016 SAK1YER129W 3429 nt2.97□□□□□ -1.93
RPN3P40016 snR76snR76 109 nt2.97□□□□□ -1.93
RPN3P40016 YJL135WYJL135W 318 nt2.97□□□□□ -1.93
RPN3P40016 NUT2YPR168W 474 nt2.97□□□□□ -1.93
RPN3P40016 YPL216WYPL216W 3309 nt2.97□□□□□ -1.93
RPN3P40016 NET1YJL076W 3570 nt2.97□□□□□ -1.93
RPN3P40016 VAS1YGR094W 3315 nt2.96□□□□□ -1.93
RPN3P40016 tW(CCA)G1tW(CCA)G1 72 nt2.96□□□□□ -1.94
RPN3P40016 tW(CCA)G2tW(CCA)G2 72 nt2.96□□□□□ -1.94
RPN3P40016 tW(CCA)JtW(CCA)J 72 nt2.96□□□□□ -1.94
RPN3P40016 tW(CCA)KtW(CCA)K 72 nt2.96□□□□□ -1.94
RPN3P40016 tW(CCA)MtW(CCA)M 72 nt2.96□□□□□ -1.94
RPN3P40016 tW(CCA)PtW(CCA)P 72 nt2.96□□□□□ -1.94
RPN3P40016 VPS55YJR044C 423 nt2.96□□□□□ -1.94
RPN3P40016 YLR140WYLR140W 327 nt2.96□□□□□ -1.94
RPN3P40016 YMR194C-AYMR194C-A 225 nt2.96□□□□□ -1.94
RPN3P40016 AI5_ALPHAQ0070 1893 nt2.96□□□□□ -1.94
RPN3P40016 TMN3YER113C 2121 nt2.96□□□□□ -1.94
RPN3P40016 DNL4YOR005C 2835 nt2.95□□□□□ -1.94
RPN3P40016 ATG13YPR185W 2217 nt2.95□□□□□ -1.94
RPN3P40016 SSS1YDR086C 243 nt2.95□□□□□ -1.94
RPN3P40016 OLI1Q0130 231 nt2.95□□□□□ -1.94
RPN3P40016 YLR255CYLR255C 354 nt2.95□□□□□ -1.94
RPN3P40016 YPL150WYPL150W 2706 nt2.95□□□□□ -1.94
RPN3P40016 MOT1YPL082C 5604 nt2.95□□□□□ -1.94
RPN3P40016 KAP104YBR017C 2757 nt2.95□□□□□ -1.94
RPN3P40016 UBP11YKR098C 2154 nt2.94□□□□□ -1.94
RPN3P40016 VPS35YJL154C 2835 nt2.94□□□□□ -1.94
RPN3P40016 NUP120YKL057C 3114 nt2.94□□□□□ -1.94
RPN3P40016 YKU70YMR284W 1809 nt2.94□□□□□ -1.94
RPN3P40016 snR70snR70 164 nt2.94□□□□□ -1.94
RPN3P40016 YLR154C-HYLR154C-H 132 nt2.94□□□□□ -1.94
RPN3P40016 YLR156C-AYLR156C-A 132 nt2.94□□□□□ -1.94
RPN3P40016 YLR157C-CYLR157C-C 132 nt2.94□□□□□ -1.94
RPN3P40016 YLR159C-AYLR159C-A 132 nt2.94□□□□□ -1.94
RPN3P40016 YNL205CYNL205C 423 nt2.94□□□□□ -1.94
RPN3P40016 TAO3YIL129C 7131 nt2.94□□□□□ -1.94
RPN3P40016 PTC5YOR090C 1719 nt2.93□□□□□ -1.94
RPN3P40016 HSC82YMR186W 2118 nt2.93□□□□□ -1.94
RPN3P40016 LCD1YDR499W 2244 nt2.93□□□□□ -1.94
RPN3P40016 YGR067CYGR067C 2415 nt2.93□□□□□ -1.94
RPN3P40016 TFC4YGR047C 3078 nt2.92□□□□□ -1.94
RPN3P40016 YPP1YGR198W 2454 nt2.92□□□□□ -1.94
RPN3P40016 SDH6YDR379C-A 240 nt2.92□□□□□ -1.94
RPN3P40016 DYN2YDR424C 279 nt2.92□□□□□ -1.94
RPN3P40016 INA22YIR024C 651 nt2.92□□□□□ -1.94
RPN3P40016 SNC2YOR327C 348 nt2.92□□□□□ -1.94
RPN3P40016 YOR333CYOR333C 417 nt2.92□□□□□ -1.94
RPN3P40016 YPR002C-AYPR002C-A 198 nt2.92□□□□□ -1.94
RPN3P40016 YBR224WYBR224W 516 nt2.92□□□□□ -1.94
RPN3P40016 PEX8YGR077C 1770 nt2.92□□□□□ -1.94
RPN3P40016 TCB2YNL087W 3537 nt2.91□□□□□ -1.94
RPN3P40016 TFC1YBR123C 1950 nt2.91□□□□□ -1.94
RPN3P40016 KSP1YHR082C 3090 nt2.91□□□□□ -1.94
RPN3P40016 TRX1YLR043C 312 nt2.91□□□□□ -1.94
RPN3P40016 CDC27YBL084C 2277 nt2.91□□□□□ -1.94
RPN3P40016 PDE2YOR360C 1581 nt2.91□□□□□ -1.94
RPN3P40016 PHD1YKL043W 1101 nt2.9□□□□□ -1.95
RPN3P40016 VMA9YCL005W-A 222 nt2.9□□□□□ -1.95
RPN3P40016 YPR089WYPR089W 2667 nt2.9□□□□□ -1.95
RPN3P40016 RGR1YLR071C 3249 nt2.89□□□□□ -1.95
RPN3P40016 NOP53YPL146C 1368 nt2.89□□□□□ -1.95
RPN3P40016 CFT2YLR115W 2580 nt2.89□□□□□ -1.95
RPN3P40016 FKS3YMR306W 5358 nt2.89□□□□□ -1.95
RPN3P40016 DNA2YHR164C 4569 nt2.89□□□□□ -1.95
RPN3P40016 PHO2YDL106C 1680 nt2.88□□□□□ -1.95
RPN3P40016 DSE4YNR067C 3354 nt2.88□□□□□ -1.95
RPN3P40016 CYR1YJL005W 6081 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 40.2 ms