Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 PCF11YDR228C 1881 nt2.06□□□□□ -2.08
VPS52P39904 CDC50YCR094W 1176 nt2.06□□□□□ -2.08
VPS52P39904 TIM9YEL020W-A 264 nt2.06□□□□□ -2.08
VPS52P39904 YHR180W-AYHR180W-A 183 nt2.06□□□□□ -2.08
VPS52P39904 YAR053WYAR053W 297 nt2.06□□□□□ -2.08
VPS52P39904 YBR121C-AYBR121C-A 159 nt2.06□□□□□ -2.08
VPS52P39904 DNF1YER166W 4716 nt2.06□□□□□ -2.08
VPS52P39904 QCR7YDR529C 384 nt2.05□□□□□ -2.08
VPS52P39904 RPS24AYER074W 408 nt2.05□□□□□ -2.08
VPS52P39904 YGL239CYGL239C 315 nt2.05□□□□□ -2.08
VPS52P39904 ATP7YKL016C 525 nt2.05□□□□□ -2.08
VPS52P39904 YAL059C-AYAL059C-A 423 nt2.05□□□□□ -2.08
VPS52P39904 YPL225WYPL225W 441 nt2.05□□□□□ -2.08
VPS52P39904 AFI1YOR129C 2682 nt2.04□□□□□ -2.08
VPS52P39904 PUT3YKL015W 2940 nt2.04□□□□□ -2.08
VPS52P39904 KOG1YHR186C 4674 nt2.04□□□□□ -2.08
VPS52P39904 UBP1YDL122W 2430 nt2.04□□□□□ -2.08
VPS52P39904 CLN3YAL040C 1743 nt2.04□□□□□ -2.08
VPS52P39904 MRPL31YKL138C 396 nt2.04□□□□□ -2.08
VPS52P39904 TFC3YAL001C 3483 nt2.04□□□□□ -2.08
VPS52P39904 DOT6YER088C 2013 nt2.03□□□□□ -2.08
VPS52P39904 MCD1YDL003W 1701 nt2.03□□□□□ -2.08
VPS52P39904 WIP1YDR374W-A 270 nt2.03□□□□□ -2.08
VPS52P39904 RPL27BYDR471W 411 nt2.03□□□□□ -2.08
VPS52P39904 GCN4YEL009C 846 nt2.03□□□□□ -2.08
VPS52P39904 TWF1YGR080W 999 nt2.03□□□□□ -2.08
VPS52P39904 YIL066W-AYIL066W-A 444 nt2.03□□□□□ -2.08
VPS52P39904 SNC1YAL030W 354 nt2.03□□□□□ -2.08
VPS52P39904 RPL26AYLR344W 384 nt2.03□□□□□ -2.08
VPS52P39904 PGA1YNL158W 597 nt2.03□□□□□ -2.08
VPS52P39904 IRC8YJL051W 2469 nt2.02□□□□□ -2.09
VPS52P39904 UTP22YGR090W 3714 nt2.02□□□□□ -2.09
VPS52P39904 CRM1YGR218W 3255 nt2.02□□□□□ -2.09
VPS52P39904 DAD4YDR320C-A 219 nt2.02□□□□□ -2.09
VPS52P39904 YKL118WYKL118W 312 nt2.02□□□□□ -2.09
VPS52P39904 ISF1YMR081C 1017 nt2.02□□□□□ -2.09
VPS52P39904 IRC23YOR044W 474 nt2.02□□□□□ -2.09
VPS52P39904 RIC1YLR039C 3171 nt2.02□□□□□ -2.09
VPS52P39904 MMS22YLR320W 4365 nt2.01□□□□□ -2.09
VPS52P39904 YGR174W-AYGR174W-A 87 nt2.01□□□□□ -2.09
VPS52P39904 ABM1YJR108W 372 nt2.01□□□□□ -2.09
VPS52P39904 YMR320WYMR320W 306 nt2.01□□□□□ -2.09
VPS52P39904 YNL277W-AYNL277W-A 189 nt2.01□□□□□ -2.09
VPS52P39904 DIS3YOL021C 3006 nt2.01□□□□□ -2.09
VPS52P39904 AIM9YER080W 1884 nt2.01□□□□□ -2.09
VPS52P39904 TIM13YGR181W 318 nt2□□□□□ -2.09
VPS52P39904 YJL020W-AYJL020W-A 258 nt2□□□□□ -2.09
VPS52P39904 YKL083WYKL083W 615 nt2□□□□□ -2.09
VPS52P39904 YAF9YNL107W 681 nt2□□□□□ -2.09
VPS52P39904 YBL073WYBL073W 312 nt2□□□□□ -2.09
VPS52P39904 YPR099CYPR099C 357 nt2□□□□□ -2.09
VPS52P39904 CDC53YDL132W 2448 nt2□□□□□ -2.09
VPS52P39904 NUP100YKL068W 2880 nt1.99□□□□□ -2.09
VPS52P39904 YGL069CYGL069C 465 nt1.99□□□□□ -2.09
VPS52P39904 YOR199WYOR199W 330 nt1.99□□□□□ -2.09
VPS52P39904 SAP185YJL098W 3177 nt1.99□□□□□ -2.09
VPS52P39904 CDC27YBL084C 2277 nt1.98□□□□□ -2.09
VPS52P39904 SMY1YKL079W 1971 nt1.98□□□□□ -2.09
VPS52P39904 SSQ1YLR369W 1974 nt1.98□□□□□ -2.09
VPS52P39904 BRP1YGL007W 378 nt1.98□□□□□ -2.09
VPS52P39904 tW(UCA)QtW(UCA)Q 74 nt1.98□□□□□ -2.09
VPS52P39904 HSK3YKL138C-A 210 nt1.98□□□□□ -2.09
VPS52P39904 RPS27AYKL156W 249 nt1.98□□□□□ -2.09
VPS52P39904 YPL229WYPL229W 621 nt1.98□□□□□ -2.09
VPS52P39904 SPO22YIL073C 2928 nt1.98□□□□□ -2.09
VPS52P39904 ALK2YBL009W 2031 nt1.98□□□□□ -2.09
VPS52P39904 YPR097WYPR097W 3222 nt1.97□□□□□ -2.09
VPS52P39904 LYS9YNR050C 1341 nt1.97□□□□□ -2.09
VPS52P39904 NOT5YPR072W 1683 nt1.97□□□□□ -2.09
VPS52P39904 YJL052C-AYJL052C-A 120 nt1.97□□□□□ -2.09
VPS52P39904 HCH1YNL281W 462 nt1.97□□□□□ -2.09
VPS52P39904 TIM18YOR297C 579 nt1.97□□□□□ -2.09
VPS52P39904 YBR224WYBR224W 516 nt1.97□□□□□ -2.09
VPS52P39904 YCL023CYCL023C 348 nt1.97□□□□□ -2.09
VPS52P39904 SNF5YBR289W 2718 nt1.97□□□□□ -2.09
VPS52P39904 USO1YDL058W 5373 nt1.97□□□□□ -2.09
VPS52P39904 PAN3YKL025C 2040 nt1.96□□□□□ -2.09
VPS52P39904 TOF2YKR010C 2316 nt1.96□□□□□ -2.1
VPS52P39904 YDL152WYDL152W 366 nt1.96□□□□□ -2.1
VPS52P39904 YDR102CYDR102C 333 nt1.96□□□□□ -2.1
VPS52P39904 YHL037CYHL037C 402 nt1.96□□□□□ -2.1
VPS52P39904 YLR149CYLR149C 2193 nt1.96□□□□□ -2.1
VPS52P39904 PEP3YLR148W 2757 nt1.96□□□□□ -2.1
VPS52P39904 RGA1YOR127W 3024 nt1.96□□□□□ -2.1
VPS52P39904 RAV1YJR033C 4074 nt1.95□□□□□ -2.1
VPS52P39904 YBR184WYBR184W 1572 nt1.95□□□□□ -2.1
VPS52P39904 MNL2YLR057W 2550 nt1.95□□□□□ -2.1
VPS52P39904 BRE1YDL074C 2103 nt1.95□□□□□ -2.1
VPS52P39904 SPP41YDR464W 4308 nt1.95□□□□□ -2.1
VPS52P39904 SCH9YHR205W 2475 nt1.95□□□□□ -2.1
VPS52P39904 RBK1YCR036W 1002 nt1.94□□□□□ -2.1
VPS52P39904 NHP2YDL208W 471 nt1.94□□□□□ -2.1
VPS52P39904 YDR413CYDR413C 576 nt1.94□□□□□ -2.1
VPS52P39904 EMP24YGL200C 612 nt1.94□□□□□ -2.1
VPS52P39904 MAM33YIL070C 801 nt1.94□□□□□ -2.1
VPS52P39904 PAU8YAL068C 363 nt1.94□□□□□ -2.1
VPS52P39904 PAU20YOL161C 363 nt1.94□□□□□ -2.1
VPS52P39904 SEF1YBL066C 3447 nt1.94□□□□□ -2.1
VPS52P39904 MGM1YOR211C 2646 nt1.94□□□□□ -2.1
VPS52P39904 STB4YMR019W 2850 nt1.93□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms