Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YNR021WYNR021W 1215 nt0.36□□□□□ -2.35
SSN2P38931 MUD2YKL074C 1584 nt0.35□□□□□ -2.35
SSN2P38931 TMA20YER007C-A 546 nt0.35□□□□□ -2.35
SSN2P38931 YFL012W-AYFL012W-A 375 nt0.35□□□□□ -2.35
SSN2P38931 VPS25YJR102C 609 nt0.35□□□□□ -2.35
SSN2P38931 YKE2YLR200W 345 nt0.35□□□□□ -2.35
SSN2P38931 VPS28YPL065W 729 nt0.35□□□□□ -2.35
SSN2P38931 SUT2YPR009W 807 nt0.35□□□□□ -2.35
SSN2P38931 GDS1YOR355W 1569 nt0.35□□□□□ -2.35
SSN2P38931 SLX4YLR135W 2247 nt0.34□□□□□ -2.35
SSN2P38931 PXA2YKL188C 2562 nt0.34□□□□□ -2.35
SSN2P38931 SMB1YER029C 591 nt0.34□□□□□ -2.36
SSN2P38931 COX6YHR051W 447 nt0.34□□□□□ -2.36
SSN2P38931 YIL030W-AYIL030W-A 339 nt0.34□□□□□ -2.36
SSN2P38931 YJL127C-BYJL127C-B 159 nt0.34□□□□□ -2.36
SSN2P38931 YLR458WYLR458W 381 nt0.34□□□□□ -2.36
SSN2P38931 POP8YBL018C 402 nt0.34□□□□□ -2.36
SSN2P38931 YNL162W-AYNL162W-A 219 nt0.34□□□□□ -2.36
SSN2P38931 MUM2YBR057C 1101 nt0.34□□□□□ -2.36
SSN2P38931 NUP120YKL057C 3114 nt0.34□□□□□ -2.36
SSN2P38931 GLG1YKR058W 1851 nt0.33□□□□□ -2.36
SSN2P38931 snR63snR63 255 nt0.33□□□□□ -2.36
SSN2P38931 PRM8YGL053W 714 nt0.33□□□□□ -2.36
SSN2P38931 YMR324CYMR324C 243 nt0.33□□□□□ -2.36
SSN2P38931 ATX1YNL259C 222 nt0.33□□□□□ -2.36
SSN2P38931 YCR043CYCR043C 384 nt0.32□□□□□ -2.36
SSN2P38931 YGL217CYGL217C 342 nt0.32□□□□□ -2.36
SSN2P38931 LAG1YHL003C 1236 nt0.32□□□□□ -2.36
SSN2P38931 ABM1YJR108W 372 nt0.32□□□□□ -2.36
SSN2P38931 ATP18YML081C-A 180 nt0.32□□□□□ -2.36
SSN2P38931 BRX1YOL077C 876 nt0.32□□□□□ -2.36
SSN2P38931 NIP100YPL174C 2607 nt0.32□□□□□ -2.36
SSN2P38931 RSM28YDR494W 1086 nt0.31□□□□□ -2.36
SSN2P38931 YER046W-AYER046W-A 330 nt0.31□□□□□ -2.36
SSN2P38931 COG7YGL005C 840 nt0.31□□□□□ -2.36
SSN2P38931 YAL064WYAL064W 285 nt0.31□□□□□ -2.36
SSN2P38931 YPL135C-AYPL135C-A 174 nt0.31□□□□□ -2.36
SSN2P38931 snR45snR45 172 nt0.31□□□□□ -2.36
SSN2P38931 SGO1YOR073W 1773 nt0.31□□□□□ -2.36
SSN2P38931 RPC25YKL144C 639 nt0.3□□□□□ -2.36
SSN2P38931 HYM1YKL189W 1200 nt0.3□□□□□ -2.36
SSN2P38931 SWM2YNR004W 441 nt0.3□□□□□ -2.36
SSN2P38931 IRC14YOR135C 342 nt0.3□□□□□ -2.36
SSN2P38931 ICS2YBR157C 768 nt0.3□□□□□ -2.36
SSN2P38931 NUR1YDL089W 1455 nt0.3□□□□□ -2.36
SSN2P38931 SEC5YDR166C 2916 nt0.3□□□□□ -2.36
SSN2P38931 NGG1YDR176W 2109 nt0.3□□□□□ -2.36
SSN2P38931 EDC1YGL222C 528 nt0.3□□□□□ -2.36
SSN2P38931 PEP3YLR148W 2757 nt0.29□□□□□ -2.36
SSN2P38931 CYC7YEL039C 342 nt0.29□□□□□ -2.36
SSN2P38931 YNL067W-AYNL067W-A 147 nt0.29□□□□□ -2.36
SSN2P38931 RPL32YBL092W 393 nt0.29□□□□□ -2.36
SSN2P38931 SPT21YMR179W 2277 nt0.28□□□□□ -2.36
SSN2P38931 YBL100W-BYBL100W-B 5313 nt0.28□□□□□ -2.36
SSN2P38931 DUO1YGL061C 744 nt0.28□□□□□ -2.37
SSN2P38931 YJL032WYJL032W 315 nt0.28□□□□□ -2.37
SSN2P38931 RCN1YKL159C 636 nt0.28□□□□□ -2.37
SSN2P38931 FAR3YMR052W 615 nt0.28□□□□□ -2.37
SSN2P38931 MXR1YER042W 555 nt0.27□□□□□ -2.37
SSN2P38931 YOL050CYOL050C 321 nt0.27□□□□□ -2.37
SSN2P38931 YOL085W-AYOL085W-A 213 nt0.27□□□□□ -2.37
SSN2P38931 OSH6YKR003W 1347 nt0.27□□□□□ -2.37
SSN2P38931 GMC2YLR445W 567 nt0.26□□□□□ -2.37
SSN2P38931 RPL9BYNL067W 576 nt0.26□□□□□ -2.37
SSN2P38931 YDL206WYDL206W 2289 nt0.25□□□□□ -2.37
SSN2P38931 ECM12YHR021W-A 456 nt0.25□□□□□ -2.37
SSN2P38931 CGI121YML036W 546 nt0.25□□□□□ -2.37
SSN2P38931 YOL024WYOL024W 519 nt0.25□□□□□ -2.37
SSN2P38931 IZH4YOL101C 939 nt0.25□□□□□ -2.37
SSN2P38931 FMP23YBR047W 528 nt0.25□□□□□ -2.37
SSN2P38931 YBP2YGL060W 1926 nt0.25□□□□□ -2.37
SSN2P38931 SWF1YDR126W 1011 nt0.24□□□□□ -2.37
SSN2P38931 BMT5YIL096C 1011 nt0.24□□□□□ -2.37
SSN2P38931 GPI2YPL076W 843 nt0.24□□□□□ -2.37
SSN2P38931 NDD1YOR372C 1665 nt0.24□□□□□ -2.37
SSN2P38931 TOF2YKR010C 2316 nt0.24□□□□□ -2.37
SSN2P38931 YGL109WYGL109W 324 nt0.23□□□□□ -2.37
SSN2P38931 GOS1YHL031C 672 nt0.23□□□□□ -2.37
SSN2P38931 YHL048C-AYHL048C-A 135 nt0.23□□□□□ -2.37
SSN2P38931 NEJ1YLR265C 1029 nt0.23□□□□□ -2.37
SSN2P38931 snR13snR13 124 nt0.23□□□□□ -2.37
SSN2P38931 YPR142CYPR142C 564 nt0.23□□□□□ -2.37
SSN2P38931 ERV15YBR210W 429 nt0.23□□□□□ -2.37
SSN2P38931 HDA3YPR179C 1968 nt0.23□□□□□ -2.37
SSN2P38931 NOT5YPR072W 1683 nt0.22□□□□□ -2.37
SSN2P38931 YCR016WYCR016W 873 nt0.22□□□□□ -2.37
SSN2P38931 YAR053WYAR053W 297 nt0.22□□□□□ -2.37
SSN2P38931 SLS1YLR139C 1932 nt0.22□□□□□ -2.37
SSN2P38931 YDL196WYDL196W 330 nt0.21□□□□□ -2.38
SSN2P38931 YDR290WYDR290W 330 nt0.21□□□□□ -2.38
SSN2P38931 YET2YMR040W 483 nt0.21□□□□□ -2.38
SSN2P38931 ABF2YMR072W 552 nt0.21□□□□□ -2.38
SSN2P38931 YOL150CYOL150C 312 nt0.21□□□□□ -2.38
SSN2P38931 YBR012CYBR012C 420 nt0.21□□□□□ -2.38
SSN2P38931 GPX2YBR244W 489 nt0.21□□□□□ -2.38
SSN2P38931 NUT1YGL151W 3399 nt0.21□□□□□ -2.38
SSN2P38931 YER147C-AYER147C-A 411 nt0.21□□□□□ -2.38
SSN2P38931 KEG1YFR042W 603 nt0.21□□□□□ -2.38
SSN2P38931 RSM27YGR215W 333 nt0.21□□□□□ -2.38
SSN2P38931 YMR173W-AYMR173W-A 1185 nt0.21□□□□□ -2.38
Retrieved 100 of 7,029 protein–RNA pairs in 62.9 ms