Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 YBR121C-AYBR121C-A 159 nt2.67□□□□□ -1.98
TDP1P38319 SSE1YPL106C 2082 nt2.67□□□□□ -1.98
TDP1P38319 DIS3YOL021C 3006 nt2.66□□□□□ -1.98
TDP1P38319 GCV2YMR189W 3105 nt2.66□□□□□ -1.98
TDP1P38319 RPL23BYER117W 414 nt2.66□□□□□ -1.98
TDP1P38319 AYR1YIL124W 894 nt2.66□□□□□ -1.98
TDP1P38319 RPL25YOL127W 429 nt2.66□□□□□ -1.98
TDP1P38319 HHT1YBR010W 411 nt2.66□□□□□ -1.98
TDP1P38319 ECM21YBL101C 3354 nt2.65□□□□□ -1.98
TDP1P38319 MSB2YGR014W 3921 nt2.65□□□□□ -1.99
TDP1P38319 snR60snR60 104 nt2.65□□□□□ -1.99
TDP1P38319 YEL014CYEL014C 306 nt2.65□□□□□ -1.99
TDP1P38319 VPS55YJR044C 423 nt2.65□□□□□ -1.99
TDP1P38319 YLR140WYLR140W 327 nt2.65□□□□□ -1.99
TDP1P38319 YMR324CYMR324C 243 nt2.65□□□□□ -1.99
TDP1P38319 YBT1YLL048C 4986 nt2.65□□□□□ -1.99
TDP1P38319 KEL2YGR238C 2649 nt2.65□□□□□ -1.99
TDP1P38319 YIL082W-AYIL082W-A 4497 nt2.65□□□□□ -1.99
TDP1P38319 BAS1YKR099W 2436 nt2.64□□□□□ -1.99
TDP1P38319 YAL042C-AYAL042C-A 378 nt2.64□□□□□ -1.99
TDP1P38319 PFF1YBR074W 2931 nt2.64□□□□□ -1.99
TDP1P38319 ESC1YMR219W 4977 nt2.63□□□□□ -1.99
TDP1P38319 ASG1YIL130W 2895 nt2.63□□□□□ -1.99
TDP1P38319 NPC2YDL046W 522 nt2.63□□□□□ -1.99
TDP1P38319 QCR7YDR529C 384 nt2.63□□□□□ -1.99
TDP1P38319 MRPL33YMR286W 261 nt2.63□□□□□ -1.99
TDP1P38319 SSN2YDR443C 4263 nt2.62□□□□□ -1.99
TDP1P38319 SUL1YBR294W 2580 nt2.62□□□□□ -1.99
TDP1P38319 YIL080WYIL080W 4722 nt2.61□□□□□ -1.99
TDP1P38319 YGR250CYGR250C 2346 nt2.61□□□□□ -1.99
TDP1P38319 RBK1YCR036W 1002 nt2.61□□□□□ -1.99
TDP1P38319 OLI1Q0130 231 nt2.61□□□□□ -1.99
TDP1P38319 RPS27AYKL156W 249 nt2.61□□□□□ -1.99
TDP1P38319 snR48snR48 113 nt2.61□□□□□ -1.99
TDP1P38319 CAF120YNL278W 3183 nt2.61□□□□□ -1.99
TDP1P38319 UTP14YML093W 2700 nt2.6□□□□□ -1.99
TDP1P38319 GEA1YJR031C 4227 nt2.6□□□□□ -1.99
TDP1P38319 ERP6YGL002W 651 nt2.6□□□□□ -1.99
TDP1P38319 YGR164WYGR164W 336 nt2.6□□□□□ -1.99
TDP1P38319 YIL059CYIL059C 366 nt2.6□□□□□ -1.99
TDP1P38319 YLR120W-AYLR120W-A 102 nt2.6□□□□□ -1.99
TDP1P38319 RPL38YLR325C 237 nt2.6□□□□□ -1.99
TDP1P38319 COX14YML129C 213 nt2.6□□□□□ -1.99
TDP1P38319 YMR321CYMR321C 318 nt2.6□□□□□ -1.99
TDP1P38319 YNL028WYNL028W 318 nt2.6□□□□□ -1.99
TDP1P38319 YDR098C-BYDR098C-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YDR210C-DYDR210C-D 5268 nt2.6□□□□□ -1.99
TDP1P38319 YDR316W-BYDR316W-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YDR365W-BYDR365W-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YER138CYER138C 5268 nt2.6□□□□□ -1.99
TDP1P38319 YER160CYER160C 5268 nt2.6□□□□□ -1.99
TDP1P38319 YGR038C-BYGR038C-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YGR161C-DYGR161C-D 5268 nt2.6□□□□□ -1.99
TDP1P38319 YJR027WYJR027W 5268 nt2.6□□□□□ -1.99
TDP1P38319 YLR157C-BYLR157C-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YML039WYML039W 5268 nt2.6□□□□□ -1.99
TDP1P38319 YML045WYML045W 5268 nt2.6□□□□□ -1.99
TDP1P38319 YMR050CYMR050C 5268 nt2.6□□□□□ -1.99
TDP1P38319 YOL103W-BYOL103W-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YBR012W-BYBR012W-B 5271 nt2.6□□□□□ -1.99
TDP1P38319 YOR142W-BYOR142W-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YPL257W-BYPL257W-B 5268 nt2.6□□□□□ -1.99
TDP1P38319 YPR158W-BYPR158W-B 5271 nt2.6□□□□□ -1.99
TDP1P38319 SDC25YLL016W 3147 nt2.59□□□□□ -1.99
TDP1P38319 YDR239CYDR239C 2364 nt2.59□□□□□ -1.99
TDP1P38319 MDM20YOL076W 2391 nt2.59□□□□□ -1.99
TDP1P38319 NUP120YKL057C 3114 nt2.59□□□□□ -1.99
TDP1P38319 HYP2YEL034W 474 nt2.59□□□□□ -1.99
TDP1P38319 LSO2YGR169C-A 279 nt2.59□□□□□ -1.99
TDP1P38319 RAM2YKL019W 951 nt2.59□□□□□ -1.99
TDP1P38319 YLR154W-EYLR154W-E 204 nt2.59□□□□□ -1.99
TDP1P38319 YML037CYML037C 1023 nt2.59□□□□□ -1.99
TDP1P38319 NCL1YBL024W 2055 nt2.59□□□□□ -2
TDP1P38319 SRO77YBL106C 3033 nt2.58□□□□□ -2
TDP1P38319 NAB3YPL190C 2409 nt2.58□□□□□ -2
TDP1P38319 CSE2YNR010W 450 nt2.58□□□□□ -2
TDP1P38319 YOR015WYOR015W 360 nt2.58□□□□□ -2
TDP1P38319 KAR3YPR141C 2190 nt2.58□□□□□ -2
TDP1P38319 GIN4YDR507C 3429 nt2.58□□□□□ -2
TDP1P38319 YPR089WYPR089W 2667 nt2.57□□□□□ -2
TDP1P38319 AI5_ALPHAQ0070 1893 nt2.57□□□□□ -2
TDP1P38319 YGL024WYGL024W 336 nt2.57□□□□□ -2
TDP1P38319 PCC1YKR095W-A 267 nt2.57□□□□□ -2
TDP1P38319 YBL083CYBL083C 426 nt2.57□□□□□ -2
TDP1P38319 HDA3YPR179C 1968 nt2.57□□□□□ -2
TDP1P38319 YGL069CYGL069C 465 nt2.56□□□□□ -2
TDP1P38319 UPS1YLR193C 528 nt2.56□□□□□ -2
TDP1P38319 CRS5YOR031W 210 nt2.56□□□□□ -2
TDP1P38319 RPS12YOR369C 432 nt2.56□□□□□ -2
TDP1P38319 ORC1YML065W 2745 nt2.56□□□□□ -2
TDP1P38319 PRP6YBR055C 2700 nt2.56□□□□□ -2
TDP1P38319 RGA2YDR379W 3030 nt2.56□□□□□ -2
TDP1P38319 KSP1YHR082C 3090 nt2.55□□□□□ -2
TDP1P38319 MRP10YDL045W-A 288 nt2.55□□□□□ -2
TDP1P38319 COF1YLL050C 432 nt2.55□□□□□ -2
TDP1P38319 RRT15YLR162W-A 189 nt2.55□□□□□ -2
TDP1P38319 IKI3YLR384C 4050 nt2.55□□□□□ -2
TDP1P38319 PHO2YDL106C 1680 nt2.54□□□□□ -2
TDP1P38319 YBL005W-BYBL005W-B 5268 nt2.54□□□□□ -2
TDP1P38319 YML007C-AYML007C-A 111 nt2.54□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms