Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
RORAP35398 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.27■□□□□ 0.67
RORAP35398 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RORAP35398 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.27■□□□□ 0.67
RORAP35398 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RORAP35398 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.26■□□□□ 0.67
RORAP35398 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.26■□□□□ 0.67
RORAP35398 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 SLC25A24-204ENST00000569674 2357 ntBASIC19.26■□□□□ 0.67
RORAP35398 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.26■□□□□ 0.67
RORAP35398 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.26■□□□□ 0.67
RORAP35398 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.26■□□□□ 0.67
RORAP35398 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.26■□□□□ 0.67
RORAP35398 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
RORAP35398 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RORAP35398 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RORAP35398 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.25■□□□□ 0.67
RORAP35398 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.25■□□□□ 0.67
RORAP35398 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.25■□□□□ 0.67
RORAP35398 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.25■□□□□ 0.67
RORAP35398 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.25■□□□□ 0.67
RORAP35398 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.25■□□□□ 0.67
RORAP35398 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.25■□□□□ 0.67
RORAP35398 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.25■□□□□ 0.67
RORAP35398 AC007375.3-201ENST00000600936 2314 ntBASIC19.25■□□□□ 0.67
RORAP35398 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
RORAP35398 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RORAP35398 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.24■□□□□ 0.67
RORAP35398 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
RORAP35398 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 AF106564.1-201ENST00000607058 2553 ntBASIC19.24■□□□□ 0.67
RORAP35398 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.24■□□□□ 0.67
RORAP35398 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RORAP35398 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 KRT17P3-201ENST00000420566 1262 ntBASIC19.24■□□□□ 0.67
RORAP35398 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.24■□□□□ 0.67
RORAP35398 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.24■□□□□ 0.67
RORAP35398 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.24■□□□□ 0.67
RORAP35398 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.24■□□□□ 0.67
RORAP35398 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RORAP35398 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RORAP35398 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RORAP35398 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.23■□□□□ 0.67
RORAP35398 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 AC233263.1-201ENST00000578059 224 ntBASIC19.23■□□□□ 0.67
RORAP35398 AP006294.2-201ENST00000641667 209 ntBASIC19.23■□□□□ 0.67
RORAP35398 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RORAP35398 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.22■□□□□ 0.67
RORAP35398 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.22■□□□□ 0.67
RORAP35398 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RORAP35398 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RORAP35398 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.22■□□□□ 0.67
RORAP35398 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RORAP35398 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.22■□□□□ 0.67
RORAP35398 AC069544.1-201ENST00000609399 999 ntBASIC19.22■□□□□ 0.67
RORAP35398 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 AL359736.2-201ENST00000621992 437 ntBASIC19.22■□□□□ 0.67
RORAP35398 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RORAP35398 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms