Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
RPA3P35244 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPA3P35244 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.45■□□□□ 0.86
RPA3P35244 AL158211.5-201ENST00000623583 2518 ntBASIC20.45■□□□□ 0.86
RPA3P35244 AC004854.2-201ENST00000608450 1441 ntBASIC20.44■□□□□ 0.86
RPA3P35244 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RPA3P35244 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
RPA3P35244 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.44■□□□□ 0.86
RPA3P35244 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
RPA3P35244 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.44■□□□□ 0.86
RPA3P35244 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.44■□□□□ 0.86
RPA3P35244 EEF1DP3-203ENST00000566025 782 ntBASIC20.44■□□□□ 0.86
RPA3P35244 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.44■□□□□ 0.86
RPA3P35244 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.44■□□□□ 0.86
RPA3P35244 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.44■□□□□ 0.86
RPA3P35244 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.44■□□□□ 0.86
RPA3P35244 AC018445.3-201ENST00000624177 1945 ntBASIC20.44■□□□□ 0.86
RPA3P35244 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.44■□□□□ 0.86
RPA3P35244 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPA3P35244 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 AC098818.2-201ENST00000564925 2320 ntBASIC20.43■□□□□ 0.86
RPA3P35244 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 AC061975.6-201ENST00000579045 1553 ntBASIC20.43■□□□□ 0.86
RPA3P35244 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RPA3P35244 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
RPA3P35244 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.43■□□□□ 0.86
RPA3P35244 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.43■□□□□ 0.86
RPA3P35244 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.43■□□□□ 0.86
RPA3P35244 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.43■□□□□ 0.86
RPA3P35244 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.43■□□□□ 0.86
RPA3P35244 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.43■□□□□ 0.86
RPA3P35244 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.43■□□□□ 0.86
RPA3P35244 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.43■□□□□ 0.86
RPA3P35244 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
RPA3P35244 AP004607.4-201ENST00000530158 1459 ntBASIC20.43■□□□□ 0.86
RPA3P35244 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
RPA3P35244 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPA3P35244 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RPA3P35244 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.42■□□□□ 0.86
RPA3P35244 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
RPA3P35244 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPA3P35244 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.42■□□□□ 0.86
RPA3P35244 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RPA3P35244 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RPA3P35244 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPA3P35244 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.42■□□□□ 0.86
RPA3P35244 AC104187.1-201ENST00000607510 612 ntBASIC20.42■□□□□ 0.86
RPA3P35244 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
RPA3P35244 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.42■□□□□ 0.86
RPA3P35244 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPA3P35244 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPA3P35244 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RPA3P35244 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
RPA3P35244 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
RPA3P35244 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.41■□□□□ 0.86
RPA3P35244 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.41■□□□□ 0.86
RPA3P35244 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.41■□□□□ 0.86
RPA3P35244 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.41■□□□□ 0.86
RPA3P35244 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.41■□□□□ 0.86
RPA3P35244 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
RPA3P35244 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.41■□□□□ 0.86
RPA3P35244 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPA3P35244 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPA3P35244 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms