Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.34■■□□□ 1.01
CHRNA3P32297 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CHRNA3P32297 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CHRNA3P32297 CROCCP5-201ENST00000436658 830 ntBASIC21.34■■□□□ 1.01
CHRNA3P32297 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.34■■□□□ 1.01
CHRNA3P32297 SLC7A5P1-201ENST00000568957 537 ntBASIC21.34■■□□□ 1.01
CHRNA3P32297 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CHRNA3P32297 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHRNA3P32297 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.34■■□□□ 1.01
CHRNA3P32297 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
CHRNA3P32297 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.33■■□□□ 1.01
CHRNA3P32297 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA3P32297 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.33■■□□□ 1.01
CHRNA3P32297 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA3P32297 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA3P32297 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHRNA3P32297 POU5F1P4-201ENST00000413175 1085 ntBASIC21.33■■□□□ 1.01
CHRNA3P32297 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA3P32297 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.33■■□□□ 1.01
CHRNA3P32297 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA3P32297 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.33■■□□□ 1.01
CHRNA3P32297 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.33■■□□□ 1.01
CHRNA3P32297 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.33■■□□□ 1.01
CHRNA3P32297 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.33■■□□□ 1.01
CHRNA3P32297 AC120498.10-201ENST00000621827 505 ntBASIC21.33■■□□□ 1.01
CHRNA3P32297 AC231657.2-201ENST00000624556 255 ntBASIC21.33■■□□□ 1.01
CHRNA3P32297 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.33■■□□□ 1
CHRNA3P32297 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.33■■□□□ 1
CHRNA3P32297 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CHRNA3P32297 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CHRNA3P32297 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.32■■□□□ 1
CHRNA3P32297 AC092720.2-201ENST00000602388 1665 ntBASIC21.32■■□□□ 1
CHRNA3P32297 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.32■■□□□ 1
CHRNA3P32297 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.32■■□□□ 1
CHRNA3P32297 AC006970.2-201ENST00000450065 779 ntBASIC21.32■■□□□ 1
CHRNA3P32297 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.32■■□□□ 1
CHRNA3P32297 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.32■■□□□ 1
CHRNA3P32297 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.32■■□□□ 1
CHRNA3P32297 AC010536.3-201ENST00000620306 533 ntBASIC21.32■■□□□ 1
CHRNA3P32297 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
CHRNA3P32297 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.32■■□□□ 1
CHRNA3P32297 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.31■■□□□ 1
CHRNA3P32297 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.31■■□□□ 1
CHRNA3P32297 AC007322.1-201ENST00000426983 750 ntBASIC21.31■■□□□ 1
CHRNA3P32297 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA3P32297 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA3P32297 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.31■■□□□ 1
CHRNA3P32297 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.31■■□□□ 1
CHRNA3P32297 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CHRNA3P32297 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.31■■□□□ 1
CHRNA3P32297 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CHRNA3P32297 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 MIR663A-201ENST00000385250 93 ntBASIC21.3■■□□□ 1
CHRNA3P32297 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.3■■□□□ 1
CHRNA3P32297 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.3■■□□□ 1
CHRNA3P32297 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.3■■□□□ 1
CHRNA3P32297 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHRNA3P32297 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA3P32297 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.29■■□□□ 1
CHRNA3P32297 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
CHRNA3P32297 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHRNA3P32297 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CHRNA3P32297 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.29■■□□□ 1
CHRNA3P32297 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.29■■□□□ 1
CHRNA3P32297 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CHRNA3P32297 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms