Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 KRT18P68-201ENST00000392293 1000 ntBASIC21.37■■□□□ 1.01
MMP8P22894 AC133552.2-202ENST00000575694 574 ntBASIC21.37■■□□□ 1.01
MMP8P22894 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
MMP8P22894 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
MMP8P22894 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
MMP8P22894 AL391422.3-201ENST00000603791 2761 ntBASIC21.36■■□□□ 1.01
MMP8P22894 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.36■■□□□ 1.01
MMP8P22894 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 AC093787.1-201ENST00000450396 207 ntBASIC21.36■■□□□ 1.01
MMP8P22894 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.36■■□□□ 1.01
MMP8P22894 AL050303.2-201ENST00000619798 666 ntBASIC21.36■■□□□ 1.01
MMP8P22894 AC105020.6-201ENST00000621523 1217 ntBASIC21.36■■□□□ 1.01
MMP8P22894 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MMP8P22894 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MMP8P22894 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP8P22894 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.35■■□□□ 1.01
MMP8P22894 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP8P22894 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP8P22894 AL355472.2-201ENST00000422958 438 ntBASIC21.35■■□□□ 1.01
MMP8P22894 AC026185.1-201ENST00000445748 174 ntBASIC21.35■■□□□ 1.01
MMP8P22894 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MMP8P22894 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.35■■□□□ 1.01
MMP8P22894 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.35■■□□□ 1.01
MMP8P22894 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.35■■□□□ 1.01
MMP8P22894 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.35■■□□□ 1.01
MMP8P22894 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP8P22894 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP8P22894 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 SLC25A24-204ENST00000569674 2357 ntBASIC21.34■■□□□ 1.01
MMP8P22894 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.34■■□□□ 1.01
MMP8P22894 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.34■■□□□ 1.01
MMP8P22894 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
MMP8P22894 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 AC112907.3-201ENST00000577781 2400 ntBASIC21.34■■□□□ 1.01
MMP8P22894 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.34■■□□□ 1.01
MMP8P22894 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP8P22894 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.33■■□□□ 1.01
MMP8P22894 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.33■■□□□ 1.01
MMP8P22894 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP8P22894 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MMP8P22894 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP8P22894 CROCCP5-201ENST00000436658 830 ntBASIC21.33■■□□□ 1.01
MMP8P22894 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP8P22894 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.33■■□□□ 1.01
MMP8P22894 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.33■■□□□ 1.01
MMP8P22894 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.33■■□□□ 1.01
MMP8P22894 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
MMP8P22894 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
MMP8P22894 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.33■■□□□ 1.01
MMP8P22894 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.33■■□□□ 1.01
MMP8P22894 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.33■■□□□ 1.01
MMP8P22894 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MMP8P22894 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.33■■□□□ 1.01
MMP8P22894 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.33■■□□□ 1
MMP8P22894 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
MMP8P22894 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms