Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
NR4A1P22736 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NR4A1P22736 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NR4A1P22736 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NR4A1P22736 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 AC007225.1-201ENST00000566331 1836 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 AC027612.3-201ENST00000413684 1047 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 AC026271.2-201ENST00000428091 497 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 AC097381.1-201ENST00000429019 1296 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
NR4A1P22736 MIR6821-201ENST00000617625 74 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 MIR6084-201ENST00000622012 110 ntBASIC18.73■□□□□ 0.59
NR4A1P22736 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NR4A1P22736 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.73■□□□□ 0.59
NR4A1P22736 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.73■□□□□ 0.59
NR4A1P22736 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NR4A1P22736 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.72■□□□□ 0.59
NR4A1P22736 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.72■□□□□ 0.59
NR4A1P22736 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NR4A1P22736 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.72■□□□□ 0.59
NR4A1P22736 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 SMUG1P1-201ENST00000590640 811 ntBASIC18.72■□□□□ 0.59
NR4A1P22736 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NR4A1P22736 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.72■□□□□ 0.59
NR4A1P22736 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 TNXA-203ENST00000507684 2038 ntBASIC18.71■□□□□ 0.59
NR4A1P22736 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 YBX1P1-201ENST00000445822 960 ntBASIC18.71■□□□□ 0.59
NR4A1P22736 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.71■□□□□ 0.59
NR4A1P22736 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.71■□□□□ 0.59
NR4A1P22736 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.71■□□□□ 0.59
NR4A1P22736 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NR4A1P22736 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
NR4A1P22736 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.71■□□□□ 0.59
NR4A1P22736 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NR4A1P22736 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NR4A1P22736 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.71■□□□□ 0.58
NR4A1P22736 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR4A1P22736 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NR4A1P22736 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
NR4A1P22736 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
NR4A1P22736 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.7■□□□□ 0.58
NR4A1P22736 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.7■□□□□ 0.58
NR4A1P22736 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR4A1P22736 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NR4A1P22736 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NR4A1P22736 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.7■□□□□ 0.58
NR4A1P22736 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NR4A1P22736 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms