Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL1P22362 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL1P22362 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.46■□□□□ 0.39
CCL1P22362 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL1P22362 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL1P22362 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCL1P22362 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCL1P22362 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCL1P22362 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.46■□□□□ 0.39
CCL1P22362 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.46■□□□□ 0.38
CCL1P22362 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL1P22362 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL1P22362 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.45■□□□□ 0.38
CCL1P22362 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 KRT18P11-201ENST00000435214 1283 ntBASIC17.45■□□□□ 0.38
CCL1P22362 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.45■□□□□ 0.38
CCL1P22362 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.45■□□□□ 0.38
CCL1P22362 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.45■□□□□ 0.38
CCL1P22362 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
CCL1P22362 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.45■□□□□ 0.38
CCL1P22362 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCL1P22362 AC013268.1-206ENST00000638368 961 ntBASIC17.45■□□□□ 0.38
CCL1P22362 AC112229.1-201ENST00000639295 961 ntBASIC17.45■□□□□ 0.38
CCL1P22362 TMEM179-206ENST00000616017 1645 ntBASIC17.45■□□□□ 0.38
CCL1P22362 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL1P22362 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCL1P22362 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.45■□□□□ 0.38
CCL1P22362 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCL1P22362 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCL1P22362 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL1P22362 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL1P22362 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.44■□□□□ 0.38
CCL1P22362 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CCL1P22362 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL1P22362 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.44■□□□□ 0.38
CCL1P22362 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.44■□□□□ 0.38
CCL1P22362 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CCL1P22362 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCL1P22362 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CCL1P22362 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCL1P22362 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 AL691432.2-201ENST00000607222 2038 ntBASIC17.43■□□□□ 0.38
CCL1P22362 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 AC125437.2-201ENST00000625180 2167 ntBASIC17.43■□□□□ 0.38
CCL1P22362 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CCL1P22362 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL1P22362 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL1P22362 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.43■□□□□ 0.38
CCL1P22362 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.43■□□□□ 0.38
CCL1P22362 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.43■□□□□ 0.38
CCL1P22362 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.43■□□□□ 0.38
CCL1P22362 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL1P22362 MIR6821-201ENST00000617625 74 ntBASIC17.43■□□□□ 0.38
CCL1P22362 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.43■□□□□ 0.38
CCL1P22362 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CCL1P22362 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CCL1P22362 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.42■□□□□ 0.38
CCL1P22362 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CCL1P22362 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms