Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 AC116562.4-201ENST00000641316 2276 ntBASIC18.8■□□□□ 0.6
TNFRSF1BP20333 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TNFRSF1BP20333 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 DPP3P2-201ENST00000416030 1696 ntBASIC18.79■□□□□ 0.6
TNFRSF1BP20333 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TNFRSF1BP20333 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TNFRSF1BP20333 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 AC091799.1-201ENST00000422823 811 ntBASIC18.77■□□□□ 0.6
TNFRSF1BP20333 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF1BP20333 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
TNFRSF1BP20333 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
TNFRSF1BP20333 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 AC004854.2-201ENST00000608450 1441 ntBASIC18.76■□□□□ 0.59
TNFRSF1BP20333 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFRSF1BP20333 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms