Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 RARRES2P4-201ENST00000514074 484 ntBASIC19.74■□□□□ 0.75
CDH1P12830 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.74■□□□□ 0.75
CDH1P12830 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH1P12830 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDH1P12830 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CDH1P12830 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 MIR663A-201ENST00000385250 93 ntBASIC19.73■□□□□ 0.75
CDH1P12830 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH1P12830 AC069236.1-201ENST00000604339 616 ntBASIC19.73■□□□□ 0.75
CDH1P12830 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH1P12830 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CDH1P12830 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CDH1P12830 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.73■□□□□ 0.75
CDH1P12830 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH1P12830 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH1P12830 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH1P12830 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH1P12830 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDH1P12830 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH1P12830 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CDH1P12830 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH1P12830 AC008694.1-202ENST00000636953 945 ntBASIC19.72■□□□□ 0.75
CDH1P12830 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH1P12830 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH1P12830 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDH1P12830 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CDH1P12830 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 AL050303.2-201ENST00000619798 666 ntBASIC19.71■□□□□ 0.75
CDH1P12830 MIR2861-201ENST00000636310 90 ntBASIC19.71■□□□□ 0.75
CDH1P12830 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.71■□□□□ 0.75
CDH1P12830 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH1P12830 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH1P12830 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDH1P12830 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH1P12830 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CDH1P12830 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 CROCCP5-201ENST00000436658 830 ntBASIC19.7■□□□□ 0.74
CDH1P12830 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH1P12830 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDH1P12830 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH1P12830 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH1P12830 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH1P12830 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms