Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
COX6A1P12074 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
COX6A1P12074 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
COX6A1P12074 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.77■□□□□ 0.6
COX6A1P12074 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.77■□□□□ 0.6
COX6A1P12074 AC023632.3-201ENST00000521633 145 ntBASIC18.77■□□□□ 0.6
COX6A1P12074 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.77■□□□□ 0.6
COX6A1P12074 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.77■□□□□ 0.6
COX6A1P12074 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.77■□□□□ 0.6
COX6A1P12074 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.77■□□□□ 0.6
COX6A1P12074 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.77■□□□□ 0.6
COX6A1P12074 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.77■□□□□ 0.6
COX6A1P12074 MTDHP1-201ENST00000605323 784 ntBASIC18.77■□□□□ 0.6
COX6A1P12074 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.77■□□□□ 0.6
COX6A1P12074 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX6A1P12074 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.77■□□□□ 0.59
COX6A1P12074 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COX6A1P12074 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COX6A1P12074 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COX6A1P12074 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COX6A1P12074 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
COX6A1P12074 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
COX6A1P12074 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.76■□□□□ 0.59
COX6A1P12074 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
COX6A1P12074 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.76■□□□□ 0.59
COX6A1P12074 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.76■□□□□ 0.59
COX6A1P12074 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COX6A1P12074 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.76■□□□□ 0.59
COX6A1P12074 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.76■□□□□ 0.59
COX6A1P12074 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COX6A1P12074 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.76■□□□□ 0.59
COX6A1P12074 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.76■□□□□ 0.59
COX6A1P12074 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.76■□□□□ 0.59
COX6A1P12074 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 AL121603.2-201ENST00000557373 2117 ntBASIC18.76■□□□□ 0.59
COX6A1P12074 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.76■□□□□ 0.59
COX6A1P12074 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COX6A1P12074 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 AC008550.1-201ENST00000511500 884 ntBASIC18.75■□□□□ 0.59
COX6A1P12074 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.75■□□□□ 0.59
COX6A1P12074 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.75■□□□□ 0.59
COX6A1P12074 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COX6A1P12074 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
COX6A1P12074 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.74■□□□□ 0.59
COX6A1P12074 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
COX6A1P12074 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.74■□□□□ 0.59
COX6A1P12074 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.74■□□□□ 0.59
COX6A1P12074 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.74■□□□□ 0.59
COX6A1P12074 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
COX6A1P12074 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.74■□□□□ 0.59
COX6A1P12074 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 RPS2P4-201ENST00000476944 856 ntBASIC18.74■□□□□ 0.59
COX6A1P12074 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
COX6A1P12074 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.74■□□□□ 0.59
COX6A1P12074 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
COX6A1P12074 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.74■□□□□ 0.59
COX6A1P12074 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.74■□□□□ 0.59
COX6A1P12074 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COX6A1P12074 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms