Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.03■□□□□ 0.16
PF4V1P10720 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PF4V1P10720 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.03■□□□□ 0.16
PF4V1P10720 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.03■□□□□ 0.16
PF4V1P10720 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.03■□□□□ 0.16
PF4V1P10720 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.03■□□□□ 0.16
PF4V1P10720 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.03■□□□□ 0.16
PF4V1P10720 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PF4V1P10720 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.03■□□□□ 0.16
PF4V1P10720 MYC-209ENST00000641252 345 ntBASIC16.03■□□□□ 0.16
PF4V1P10720 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
PF4V1P10720 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
PF4V1P10720 RNF165-205ENST00000588679 2904 ntBASIC16.03■□□□□ 0.16
PF4V1P10720 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PF4V1P10720 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.03■□□□□ 0.16
PF4V1P10720 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.03■□□□□ 0.16
PF4V1P10720 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PF4V1P10720 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.02■□□□□ 0.16
PF4V1P10720 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.02■□□□□ 0.16
PF4V1P10720 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.02■□□□□ 0.16
PF4V1P10720 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PF4V1P10720 AL355472.2-201ENST00000422958 438 ntBASIC16.02■□□□□ 0.16
PF4V1P10720 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.02■□□□□ 0.16
PF4V1P10720 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.02■□□□□ 0.16
PF4V1P10720 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 AC093827.2-201ENST00000512654 315 ntBASIC16.02■□□□□ 0.16
PF4V1P10720 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.02■□□□□ 0.16
PF4V1P10720 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.02■□□□□ 0.16
PF4V1P10720 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 AC008687.6-201ENST00000596318 630 ntBASIC16.02■□□□□ 0.16
PF4V1P10720 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.02■□□□□ 0.16
PF4V1P10720 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
PF4V1P10720 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PF4V1P10720 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PF4V1P10720 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.02■□□□□ 0.15
PF4V1P10720 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PF4V1P10720 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PF4V1P10720 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PF4V1P10720 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.01■□□□□ 0.15
PF4V1P10720 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PF4V1P10720 AL137060.1-201ENST00000618151 2648 ntBASIC16.01■□□□□ 0.15
PF4V1P10720 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.01■□□□□ 0.15
PF4V1P10720 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.01■□□□□ 0.15
PF4V1P10720 PGM5P4-201ENST00000421970 445 ntBASIC16.01■□□□□ 0.15
PF4V1P10720 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.01■□□□□ 0.15
PF4V1P10720 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.01■□□□□ 0.15
PF4V1P10720 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.01■□□□□ 0.15
PF4V1P10720 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.01■□□□□ 0.15
PF4V1P10720 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.01■□□□□ 0.15
PF4V1P10720 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.01■□□□□ 0.15
PF4V1P10720 AC100791.3-201ENST00000617619 330 ntBASIC16.01■□□□□ 0.15
PF4V1P10720 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.01■□□□□ 0.15
PF4V1P10720 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.01■□□□□ 0.15
PF4V1P10720 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.01■□□□□ 0.15
PF4V1P10720 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PF4V1P10720 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PF4V1P10720 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PF4V1P10720 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16■□□□□ 0.15
PF4V1P10720 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PF4V1P10720 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16■□□□□ 0.15
PF4V1P10720 CYP21A1P-202ENST00000354927 1481 ntBASIC16■□□□□ 0.15
PF4V1P10720 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PF4V1P10720 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16■□□□□ 0.15
PF4V1P10720 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16■□□□□ 0.15
PF4V1P10720 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16■□□□□ 0.15
PF4V1P10720 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms