Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YBL100W-AYBL100W-A 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YOR192C-AYOR192C-A 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YCL020WYCL020W 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 snR70snR70 164 nt0.54□□□□□ -2.32
RPS28BP0C0X0 HTB1YDR224C 396 nt0.54□□□□□ -2.32
RPS28BP0C0X0 YER038W-AYER038W-A 381 nt0.54□□□□□ -2.32
RPS28BP0C0X0 MXR1YER042W 555 nt0.54□□□□□ -2.32
RPS28BP0C0X0 YIL030W-AYIL030W-A 339 nt0.54□□□□□ -2.32
RPS28BP0C0X0 YAL056C-AYAL056C-A 351 nt0.54□□□□□ -2.32
RPS28BP0C0X0 SLM6YBR266C 453 nt0.54□□□□□ -2.32
RPS28BP0C0X0 YDL196WYDL196W 330 nt0.53□□□□□ -2.32
RPS28BP0C0X0 BMT5YIL096C 1011 nt0.53□□□□□ -2.32
RPS28BP0C0X0 YLR012CYLR012C 300 nt0.53□□□□□ -2.32
RPS28BP0C0X0 CAT8YMR280C 4302 nt0.52□□□□□ -2.33
RPS28BP0C0X0 FMP32YFL046W 624 nt0.52□□□□□ -2.33
RPS28BP0C0X0 SNO3YFL060C 669 nt0.52□□□□□ -2.33
RPS28BP0C0X0 PFD1YJL179W 330 nt0.52□□□□□ -2.33
RPS28BP0C0X0 SNO2YNL334C 669 nt0.52□□□□□ -2.33
RPS28BP0C0X0 SPR2YOR214C 711 nt0.52□□□□□ -2.33
RPS28BP0C0X0 LAA1YJL207C 6045 nt0.51□□□□□ -2.33
RPS28BP0C0X0 SMB1YER029C 591 nt0.51□□□□□ -2.33
RPS28BP0C0X0 YGL024WYGL024W 336 nt0.51□□□□□ -2.33
RPS28BP0C0X0 AIM44YPL158C 2277 nt0.51□□□□□ -2.33
RPS28BP0C0X0 IPI3YNL182C 1668 nt0.5□□□□□ -2.33
RPS28BP0C0X0 ZIP1YDR285W 2628 nt0.5□□□□□ -2.33
RPS28BP0C0X0 YDL152WYDL152W 366 nt0.5□□□□□ -2.33
RPS28BP0C0X0 SWF1YDR126W 1011 nt0.5□□□□□ -2.33
RPS28BP0C0X0 LOC1YFR001W 615 nt0.5□□□□□ -2.33
RPS28BP0C0X0 DFG10YIL049W 762 nt0.5□□□□□ -2.33
RPS28BP0C0X0 RPL37AYLR185W 267 nt0.5□□□□□ -2.33
RPS28BP0C0X0 RPL38YLR325C 237 nt0.5□□□□□ -2.33
RPS28BP0C0X0 YOP1YPR028W 543 nt0.5□□□□□ -2.33
RPS28BP0C0X0 SAG1YJR004C 1953 nt0.49□□□□□ -2.33
RPS28BP0C0X0 tR(ACG)JtR(ACG)J 73 nt0.49□□□□□ -2.33
RPS28BP0C0X0 YHR028W-AYHR028W-A 321 nt0.49□□□□□ -2.33
RPS28BP0C0X0 YLR412C-AYLR412C-A 207 nt0.49□□□□□ -2.33
RPS28BP0C0X0 YML002WYML002W 2214 nt0.49□□□□□ -2.33
RPS28BP0C0X0 SEC1YDR164C 2175 nt0.48□□□□□ -2.33
RPS28BP0C0X0 OCA6YDR067C 675 nt0.48□□□□□ -2.33
RPS28BP0C0X0 YHR050W-AYHR050W-A 171 nt0.48□□□□□ -2.33
RPS28BP0C0X0 YSP1YHR155W 3687 nt0.48□□□□□ -2.33
RPS28BP0C0X0 MKT1YNL085W 2493 nt0.47□□□□□ -2.33
RPS28BP0C0X0 ACF4YJR083C 930 nt0.47□□□□□ -2.33
RPS28BP0C0X0 YHC1YLR298C 696 nt0.47□□□□□ -2.33
RPS28BP0C0X0 RUF22RUF22 515 nt0.47□□□□□ -2.33
RPS28BP0C0X0 VPS52YDR484W 1926 nt0.46□□□□□ -2.34
RPS28BP0C0X0 RSM23YGL129C 1353 nt0.46□□□□□ -2.34
RPS28BP0C0X0 PDE2YOR360C 1581 nt0.46□□□□□ -2.34
RPS28BP0C0X0 YDR509WYDR509W 348 nt0.46□□□□□ -2.34
RPS28BP0C0X0 YER121WYER121W 345 nt0.46□□□□□ -2.34
RPS28BP0C0X0 HIT1YJR055W 495 nt0.46□□□□□ -2.34
RPS28BP0C0X0 ATP7YKL016C 525 nt0.46□□□□□ -2.34
RPS28BP0C0X0 PSY1YKL076C 384 nt0.46□□□□□ -2.34
RPS28BP0C0X0 YBL029C-AYBL029C-A 285 nt0.46□□□□□ -2.34
RPS28BP0C0X0 PKR1YMR123W 369 nt0.46□□□□□ -2.34
RPS28BP0C0X0 ATP20YPR020W 348 nt0.46□□□□□ -2.34
RPS28BP0C0X0 LTE1YAL024C 4308 nt0.45□□□□□ -2.34
RPS28BP0C0X0 YDR003W-AYDR003W-A 123 nt0.45□□□□□ -2.34
RPS28BP0C0X0 YDR115WYDR115W 318 nt0.45□□□□□ -2.34
RPS28BP0C0X0 ERP4YOR016C 624 nt0.45□□□□□ -2.34
RPS28BP0C0X0 PAU24YBR301W 363 nt0.45□□□□□ -2.34
RPS28BP0C0X0 STO1YMR125W 2586 nt0.45□□□□□ -2.34
RPS28BP0C0X0 snR83snR83 306 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)E1tH(GUG)E1 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)E2tH(GUG)E2 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)G1tH(GUG)G1 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)G2tH(GUG)G2 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)HtH(GUG)H 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)KtH(GUG)K 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 tH(GUG)MtH(GUG)M 72 nt0.44□□□□□ -2.34
RPS28BP0C0X0 SPO75YLL005C 2607 nt0.43□□□□□ -2.34
RPS28BP0C0X0 BUD26YDR241W 288 nt0.43□□□□□ -2.34
RPS28BP0C0X0 YHR054CYHR054C 1065 nt0.43□□□□□ -2.34
RPS28BP0C0X0 tT(UGU)Q1tT(UGU)Q1 76 nt0.43□□□□□ -2.34
RPS28BP0C0X0 PAU14YIL176C 363 nt0.43□□□□□ -2.34
RPS28BP0C0X0 PAU1YJL223C 363 nt0.43□□□□□ -2.34
RPS28BP0C0X0 YMR175W-AYMR175W-A 195 nt0.43□□□□□ -2.34
RPS28BP0C0X0 YPR147CYPR147C 915 nt0.43□□□□□ -2.34
RPS28BP0C0X0 YPR177CYPR177C 372 nt0.43□□□□□ -2.34
RPS28BP0C0X0 YLL007CYLL007C 1998 nt0.43□□□□□ -2.34
RPS28BP0C0X0 TDA2YER071C 381 nt0.42□□□□□ -2.34
RPS28BP0C0X0 YLR255CYLR255C 354 nt0.42□□□□□ -2.34
RPS28BP0C0X0 YOR200WYOR200W 399 nt0.42□□□□□ -2.34
RPS28BP0C0X0 SWI5YDR146C 2130 nt0.41□□□□□ -2.34
RPS28BP0C0X0 PXA2YKL188C 2562 nt0.41□□□□□ -2.34
RPS28BP0C0X0 YDR114CYDR114C 303 nt0.41□□□□□ -2.34
RPS28BP0C0X0 ALG13YGL047W 609 nt0.41□□□□□ -2.34
RPS28BP0C0X0 ECM12YHR021W-A 456 nt0.41□□□□□ -2.34
RPS28BP0C0X0 POL32YJR043C 1053 nt0.41□□□□□ -2.34
RPS28BP0C0X0 YBR032WYBR032W 303 nt0.41□□□□□ -2.34
RPS28BP0C0X0 UTP10YJL109C 5310 nt0.4□□□□□ -2.34
RPS28BP0C0X0 FIG4YNL325C 2640 nt0.4□□□□□ -2.34
RPS28BP0C0X0 PAN2YGL094C 3348 nt0.4□□□□□ -2.34
RPS28BP0C0X0 YHR214C-CYHR214C-C 1437 nt0.4□□□□□ -2.34
RPS28BP0C0X0 SCW11YGL028C 1629 nt0.4□□□□□ -2.35
RPS28BP0C0X0 GPM2YDL021W 936 nt0.4□□□□□ -2.35
RPS28BP0C0X0 snR79snR79 84 nt0.4□□□□□ -2.35
RPS28BP0C0X0 YEL018C-AYEL018C-A 534 nt0.4□□□□□ -2.35
RPS28BP0C0X0 YEL057CYEL057C 702 nt0.4□□□□□ -2.35
RPS28BP0C0X0 YHR063W-AYHR063W-A 336 nt0.4□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 32.9 ms