Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.47■□□□□ 0.87
RETP07949 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RETP07949 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.47■□□□□ 0.87
RETP07949 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RETP07949 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.47■□□□□ 0.87
RETP07949 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.47■□□□□ 0.87
RETP07949 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.47■□□□□ 0.87
RETP07949 AL049597.2-201ENST00000565575 961 ntBASIC20.47■□□□□ 0.87
RETP07949 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RETP07949 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.47■□□□□ 0.87
RETP07949 AC244015.2-201ENST00000616358 1861 ntBASIC20.47■□□□□ 0.87
RETP07949 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RETP07949 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RETP07949 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.46■□□□□ 0.87
RETP07949 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
RETP07949 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.46■□□□□ 0.87
RETP07949 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.46■□□□□ 0.87
RETP07949 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.46■□□□□ 0.87
RETP07949 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.46■□□□□ 0.87
RETP07949 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.46■□□□□ 0.87
RETP07949 AL353708.3-201ENST00000610272 989 ntBASIC20.46■□□□□ 0.87
RETP07949 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.46■□□□□ 0.87
RETP07949 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RETP07949 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RETP07949 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.46■□□□□ 0.87
RETP07949 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RETP07949 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RETP07949 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.45■□□□□ 0.86
RETP07949 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RETP07949 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.45■□□□□ 0.86
RETP07949 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 KRASP1-201ENST00000407852 552 ntBASIC20.45■□□□□ 0.86
RETP07949 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.45■□□□□ 0.86
RETP07949 AC007322.3-201ENST00000426526 701 ntBASIC20.45■□□□□ 0.86
RETP07949 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.45■□□□□ 0.86
RETP07949 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
RETP07949 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.45■□□□□ 0.86
RETP07949 AC120498.8-201ENST00000614275 531 ntBASIC20.45■□□□□ 0.86
RETP07949 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.45■□□□□ 0.86
RETP07949 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
RETP07949 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.45■□□□□ 0.86
RETP07949 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RETP07949 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RETP07949 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
RETP07949 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.44■□□□□ 0.86
RETP07949 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.44■□□□□ 0.86
RETP07949 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RETP07949 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
RETP07949 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.44■□□□□ 0.86
RETP07949 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.44■□□□□ 0.86
RETP07949 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 AC105020.6-201ENST00000621523 1217 ntBASIC20.44■□□□□ 0.86
RETP07949 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.44■□□□□ 0.86
RETP07949 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
RETP07949 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RETP07949 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.44■□□□□ 0.86
RETP07949 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.44■□□□□ 0.86
RETP07949 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RETP07949 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
RETP07949 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.43■□□□□ 0.86
RETP07949 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.43■□□□□ 0.86
RETP07949 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.43■□□□□ 0.86
RETP07949 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RETP07949 MMP23A-201ENST00000234610 1017 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms