Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
TPM3P06753 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
TPM3P06753 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TPM3P06753 AL158211.5-201ENST00000623583 2518 ntBASIC22.67■■□□□ 1.22
TPM3P06753 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TPM3P06753 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC22.67■■□□□ 1.22
TPM3P06753 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
TPM3P06753 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
TPM3P06753 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.66■■□□□ 1.22
TPM3P06753 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
TPM3P06753 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.66■■□□□ 1.22
TPM3P06753 AC131281.2-201ENST00000520478 145 ntBASIC22.66■■□□□ 1.22
TPM3P06753 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.66■■□□□ 1.22
TPM3P06753 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TPM3P06753 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TPM3P06753 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.65■■□□□ 1.22
TPM3P06753 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.65■■□□□ 1.22
TPM3P06753 AC105233.4-201ENST00000642045 216 ntBASIC22.65■■□□□ 1.22
TPM3P06753 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TPM3P06753 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TPM3P06753 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.64■■□□□ 1.22
TPM3P06753 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
TPM3P06753 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
TPM3P06753 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.64■■□□□ 1.21
TPM3P06753 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.64■■□□□ 1.21
TPM3P06753 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.64■■□□□ 1.21
TPM3P06753 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.64■■□□□ 1.21
TPM3P06753 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.64■■□□□ 1.21
TPM3P06753 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.64■■□□□ 1.21
TPM3P06753 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
TPM3P06753 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
TPM3P06753 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC22.64■■□□□ 1.21
TPM3P06753 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TPM3P06753 AC005332.7-201ENST00000614046 2005 ntBASIC22.64■■□□□ 1.21
TPM3P06753 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TPM3P06753 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC22.63■■□□□ 1.21
TPM3P06753 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC22.63■■□□□ 1.21
TPM3P06753 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.63■■□□□ 1.21
TPM3P06753 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TPM3P06753 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.63■■□□□ 1.21
TPM3P06753 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.62■■□□□ 1.21
TPM3P06753 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC22.62■■□□□ 1.21
TPM3P06753 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
TPM3P06753 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.62■■□□□ 1.21
TPM3P06753 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 AC053503.5-201ENST00000601508 636 ntBASIC22.62■■□□□ 1.21
TPM3P06753 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.62■■□□□ 1.21
TPM3P06753 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.62■■□□□ 1.21
TPM3P06753 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC22.62■■□□□ 1.21
TPM3P06753 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.62■■□□□ 1.21
TPM3P06753 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TPM3P06753 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TPM3P06753 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TPM3P06753 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
TPM3P06753 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TPM3P06753 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.61■■□□□ 1.21
TPM3P06753 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC22.61■■□□□ 1.21
TPM3P06753 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TPM3P06753 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms