Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.32■□□□□ 0.52
HMGN1P05114 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.32■□□□□ 0.52
HMGN1P05114 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
HMGN1P05114 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HMGN1P05114 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
HMGN1P05114 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGN1P05114 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGN1P05114 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HMGN1P05114 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGN1P05114 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.31■□□□□ 0.52
HMGN1P05114 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.31■□□□□ 0.52
HMGN1P05114 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGN1P05114 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HMGN1P05114 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HMGN1P05114 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.3■□□□□ 0.52
HMGN1P05114 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HMGN1P05114 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HMGN1P05114 AC110285.6-201ENST00000617652 491 ntBASIC18.3■□□□□ 0.52
HMGN1P05114 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HMGN1P05114 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.3■□□□□ 0.52
HMGN1P05114 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
HMGN1P05114 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.3■□□□□ 0.52
HMGN1P05114 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HMGN1P05114 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HMGN1P05114 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
HMGN1P05114 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
HMGN1P05114 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGN1P05114 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L2-201ENST00000561772 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 AL031432.3-201ENST00000607698 485 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
HMGN1P05114 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L6-201ENST00000626483 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L1-201ENST00000627662 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L8-201ENST00000629013 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L3-201ENST00000630187 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L7-201ENST00000630678 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 DUX4L5-201ENST00000630834 1275 ntBASIC18.29■□□□□ 0.52
HMGN1P05114 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.29■□□□□ 0.52
HMGN1P05114 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HMGN1P05114 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.29■□□□□ 0.52
HMGN1P05114 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HMGN1P05114 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HMGN1P05114 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.28■□□□□ 0.52
HMGN1P05114 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.28■□□□□ 0.52
HMGN1P05114 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HMGN1P05114 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.28■□□□□ 0.52
HMGN1P05114 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HMGN1P05114 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HMGN1P05114 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGN1P05114 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.27■□□□□ 0.52
HMGN1P05114 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HMGN1P05114 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms