Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
APPP05067 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
APPP05067 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC24.3■■□□□ 1.48
APPP05067 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
APPP05067 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.3■■□□□ 1.48
APPP05067 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC24.3■■□□□ 1.48
APPP05067 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.3■■□□□ 1.48
APPP05067 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.3■■□□□ 1.48
APPP05067 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.3■■□□□ 1.48
APPP05067 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
APPP05067 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
APPP05067 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.29■■□□□ 1.48
APPP05067 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 C2orf69P4-201ENST00000565394 541 ntBASIC24.29■■□□□ 1.48
APPP05067 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC24.29■■□□□ 1.48
APPP05067 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
APPP05067 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC24.28■■□□□ 1.48
APPP05067 RNA5SP413-201ENST00000516373 109 ntBASIC24.28■■□□□ 1.48
APPP05067 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.28■■□□□ 1.48
APPP05067 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC24.28■■□□□ 1.48
APPP05067 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
APPP05067 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
APPP05067 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.27■■□□□ 1.48
APPP05067 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
APPP05067 MFF-205ENST00000354503 1085 ntTSL 2 BASIC24.27■■□□□ 1.48
APPP05067 GATS-209ENST00000454084 1030 ntTSL 3 BASIC24.27■■□□□ 1.48
APPP05067 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
APPP05067 CD99P1-205ENST00000527459 561 ntBASIC24.27■■□□□ 1.48
APPP05067 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
APPP05067 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC24.27■■□□□ 1.48
APPP05067 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC24.27■■□□□ 1.48
APPP05067 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC24.27■■□□□ 1.48
APPP05067 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.27■■□□□ 1.48
APPP05067 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
APPP05067 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.27■■□□□ 1.48
APPP05067 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
APPP05067 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
APPP05067 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
APPP05067 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.26■■□□□ 1.47
APPP05067 ME2-216ENST00000639850 2331 ntTSL 5 BASIC24.26■■□□□ 1.47
APPP05067 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
APPP05067 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.26■■□□□ 1.47
APPP05067 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.26■■□□□ 1.47
APPP05067 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.26■■□□□ 1.47
APPP05067 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC24.26■■□□□ 1.47
APPP05067 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.26■■□□□ 1.47
APPP05067 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
APPP05067 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
APPP05067 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
APPP05067 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.25■■□□□ 1.47
APPP05067 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC24.25■■□□□ 1.47
APPP05067 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.25■■□□□ 1.47
APPP05067 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.25■■□□□ 1.47
APPP05067 BID-203ENST00000399765 1879 ntTSL 2 BASIC24.25■■□□□ 1.47
APPP05067 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
APPP05067 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC24.24■■□□□ 1.47
APPP05067 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.24■■□□□ 1.47
APPP05067 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC24.24■■□□□ 1.47
APPP05067 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 BRWD1-AS2-201ENST00000603064 1028 ntBASIC24.24■■□□□ 1.47
APPP05067 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
APPP05067 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.24■■□□□ 1.47
APPP05067 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms