Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 YPL197CYPL197C 414 nt0.96□□□□□ -2.26
VAR1P02381 IRC16YPR038W 360 nt0.96□□□□□ -2.26
VAR1P02381 YBR224WYBR224W 516 nt0.96□□□□□ -2.26
VAR1P02381 SPE1YKL184W 1401 nt0.96□□□□□ -2.26
VAR1P02381 VPS52YDR484W 1926 nt0.95□□□□□ -2.26
VAR1P02381 MDM32YOR147W 1869 nt0.95□□□□□ -2.26
VAR1P02381 DOT6YER088C 2013 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)E1tH(GUG)E1 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)E2tH(GUG)E2 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)G1tH(GUG)G1 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)G2tH(GUG)G2 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)HtH(GUG)H 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)KtH(GUG)K 72 nt0.95□□□□□ -2.26
VAR1P02381 tH(GUG)MtH(GUG)M 72 nt0.95□□□□□ -2.26
VAR1P02381 TIM10YHR005C-A 282 nt0.95□□□□□ -2.26
VAR1P02381 YJR079WYJR079W 330 nt0.95□□□□□ -2.26
VAR1P02381 YJR141WYJR141W 1044 nt0.95□□□□□ -2.26
VAR1P02381 CMS1YLR003C 876 nt0.95□□□□□ -2.26
VAR1P02381 YBL083CYBL083C 426 nt0.95□□□□□ -2.26
VAR1P02381 RCN2YOR220W 798 nt0.95□□□□□ -2.26
VAR1P02381 RPL33BYOR234C 324 nt0.95□□□□□ -2.26
VAR1P02381 SNC2YOR327C 348 nt0.95□□□□□ -2.26
VAR1P02381 KAR3YPR141C 2190 nt0.95□□□□□ -2.26
VAR1P02381 YJR098CYJR098C 1971 nt0.95□□□□□ -2.26
VAR1P02381 EST2YLR318W 2655 nt0.95□□□□□ -2.26
VAR1P02381 UTP13YLR222C 2454 nt0.95□□□□□ -2.26
VAR1P02381 CDC27YBL084C 2277 nt0.95□□□□□ -2.26
VAR1P02381 CRM1YGR218W 3255 nt0.95□□□□□ -2.26
VAR1P02381 SWT1YOR166C 1377 nt0.95□□□□□ -2.26
VAR1P02381 NOP53YPL146C 1368 nt0.95□□□□□ -2.26
VAR1P02381 MNL2YLR057W 2550 nt0.94□□□□□ -2.26
VAR1P02381 OCA6YDR067C 675 nt0.94□□□□□ -2.26
VAR1P02381 CHZ1YER030W 462 nt0.94□□□□□ -2.26
VAR1P02381 YHR139C-AYHR139C-A 312 nt0.94□□□□□ -2.26
VAR1P02381 YKL111CYKL111C 336 nt0.94□□□□□ -2.26
VAR1P02381 CTK3YML112W 891 nt0.94□□□□□ -2.26
VAR1P02381 NOP15YNL110C 663 nt0.94□□□□□ -2.26
VAR1P02381 RPB11YOL005C 363 nt0.94□□□□□ -2.26
VAR1P02381 EGD1YPL037C 474 nt0.94□□□□□ -2.26
VAR1P02381 RPH1YER169W 2391 nt0.94□□□□□ -2.26
VAR1P02381 SEY1YOR165W 2331 nt0.94□□□□□ -2.26
VAR1P02381 VAM6YDL077C 3150 nt0.94□□□□□ -2.26
VAR1P02381 snR79snR79 84 nt0.93□□□□□ -2.26
VAR1P02381 YEL018C-AYEL018C-A 534 nt0.93□□□□□ -2.26
VAR1P02381 CIC1YHR052W 1131 nt0.93□□□□□ -2.26
VAR1P02381 AFB1YLR040C 675 nt0.93□□□□□ -2.26
VAR1P02381 PKR1YMR123W 369 nt0.93□□□□□ -2.26
VAR1P02381 YNR025CYNR025C 360 nt0.93□□□□□ -2.26
VAR1P02381 MSN5YDR335W 3675 nt0.93□□□□□ -2.26
VAR1P02381 IRE1YHR079C 3348 nt0.93□□□□□ -2.26
VAR1P02381 SPO75YLL005C 2607 nt0.93□□□□□ -2.26
VAR1P02381 IRR1YIL026C 3453 nt0.92□□□□□ -2.26
VAR1P02381 NST1YNL091W 3723 nt0.92□□□□□ -2.26
VAR1P02381 YDL158CYDL158C 309 nt0.92□□□□□ -2.26
VAR1P02381 tT(UGU)Q1tT(UGU)Q1 76 nt0.92□□□□□ -2.26
VAR1P02381 CYB5YNL111C 363 nt0.92□□□□□ -2.26
VAR1P02381 YSW1YBR148W 1830 nt0.92□□□□□ -2.26
VAR1P02381 ASM4YDL088C 1587 nt0.91□□□□□ -2.26
VAR1P02381 SMC4YLR086W 4257 nt0.91□□□□□ -2.26
VAR1P02381 SMB1YER029C 591 nt0.91□□□□□ -2.26
VAR1P02381 YER175W-AYER175W-A 165 nt0.91□□□□□ -2.26
VAR1P02381 GIC1YHR061C 945 nt0.91□□□□□ -2.26
VAR1P02381 RPL34BYIL052C 366 nt0.91□□□□□ -2.26
VAR1P02381 YKL044WYKL044W 321 nt0.91□□□□□ -2.26
VAR1P02381 DDR48YMR173W 1293 nt0.91□□□□□ -2.26
VAR1P02381 YHR214C-CYHR214C-C 1437 nt0.9□□□□□ -2.26
VAR1P02381 TRM732YMR259C 4263 nt0.9□□□□□ -2.26
VAR1P02381 RIC1YLR039C 3171 nt0.9□□□□□ -2.26
VAR1P02381 HNT1YDL125C 477 nt0.9□□□□□ -2.27
VAR1P02381 EMC4YGL231C 573 nt0.9□□□□□ -2.27
VAR1P02381 YAL016C-BYAL016C-B 186 nt0.9□□□□□ -2.27
VAR1P02381 ILM1YJR118C 612 nt0.9□□□□□ -2.27
VAR1P02381 YKL068W-AYKL068W-A 237 nt0.9□□□□□ -2.27
VAR1P02381 BER1YLR412W 825 nt0.9□□□□□ -2.27
VAR1P02381 TIF11YMR260C 462 nt0.9□□□□□ -2.27
VAR1P02381 YPR146CYPR146C 330 nt0.9□□□□□ -2.27
VAR1P02381 YBR121C-AYBR121C-A 159 nt0.9□□□□□ -2.27
VAR1P02381 GPX2YBR244W 489 nt0.9□□□□□ -2.27
VAR1P02381 SPT7YBR081C 3999 nt0.89□□□□□ -2.27
VAR1P02381 YLR149CYLR149C 2193 nt0.89□□□□□ -2.27
VAR1P02381 NCA2YPR155C 1851 nt0.89□□□□□ -2.27
VAR1P02381 snR84snR84 550 nt0.89□□□□□ -2.27
VAR1P02381 YER188C-AYER188C-A 300 nt0.89□□□□□ -2.27
VAR1P02381 SGD1YLR336C 2700 nt0.88□□□□□ -2.27
VAR1P02381 PEP3YLR148W 2757 nt0.88□□□□□ -2.27
VAR1P02381 PPN1YDR452W 2025 nt0.88□□□□□ -2.27
VAR1P02381 MTC7YEL033W 420 nt0.88□□□□□ -2.27
VAR1P02381 RPL42BYHR141C 321 nt0.88□□□□□ -2.27
VAR1P02381 CRG1YHR209W 876 nt0.88□□□□□ -2.27
VAR1P02381 GPI15YNL038W 690 nt0.88□□□□□ -2.27
VAR1P02381 RPL42AYNL162W 321 nt0.88□□□□□ -2.27
VAR1P02381 SVS1YPL163C 783 nt0.88□□□□□ -2.27
VAR1P02381 YCL046WYCL046W 324 nt0.88□□□□□ -2.27
VAR1P02381 IML1YJR138W 4755 nt0.88□□□□□ -2.27
VAR1P02381 YCR043CYCR043C 384 nt0.87□□□□□ -2.27
VAR1P02381 EMT1tM(CAU)D 73 nt0.87□□□□□ -2.27
VAR1P02381 EMT5tM(CAU)J1 73 nt0.87□□□□□ -2.27
VAR1P02381 EMT3tM(CAU)J2 73 nt0.87□□□□□ -2.27
VAR1P02381 EMT4tM(CAU)M 73 nt0.87□□□□□ -2.27
VAR1P02381 EMT2tM(CAU)O2 73 nt0.87□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 80.7 ms