Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.59■□□□□ 0.89
PMPCBO75439 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.59■□□□□ 0.89
PMPCBO75439 AC073130.3-201ENST00000624389 2278 ntBASIC20.58■□□□□ 0.89
PMPCBO75439 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PMPCBO75439 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PMPCBO75439 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.58■□□□□ 0.89
PMPCBO75439 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PMPCBO75439 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
PMPCBO75439 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 AL355472.2-201ENST00000422958 438 ntBASIC20.58■□□□□ 0.89
PMPCBO75439 AC093787.1-201ENST00000450396 207 ntBASIC20.58■□□□□ 0.89
PMPCBO75439 AL050303.2-201ENST00000619798 666 ntBASIC20.58■□□□□ 0.89
PMPCBO75439 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PMPCBO75439 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PMPCBO75439 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.58■□□□□ 0.88
PMPCBO75439 AL512408.1-201ENST00000569378 2000 ntBASIC20.58■□□□□ 0.88
PMPCBO75439 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMPCBO75439 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMPCBO75439 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMPCBO75439 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PMPCBO75439 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.57■□□□□ 0.88
PMPCBO75439 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PMPCBO75439 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.57■□□□□ 0.88
PMPCBO75439 CROCCP5-201ENST00000436658 830 ntBASIC20.57■□□□□ 0.88
PMPCBO75439 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PMPCBO75439 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PMPCBO75439 AC100791.3-201ENST00000617619 330 ntBASIC20.57■□□□□ 0.88
PMPCBO75439 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.57■□□□□ 0.88
PMPCBO75439 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
PMPCBO75439 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.57■□□□□ 0.88
PMPCBO75439 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PMPCBO75439 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PMPCBO75439 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.57■□□□□ 0.88
PMPCBO75439 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.56■□□□□ 0.88
PMPCBO75439 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.56■□□□□ 0.88
PMPCBO75439 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.56■□□□□ 0.88
PMPCBO75439 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.56■□□□□ 0.88
PMPCBO75439 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.56■□□□□ 0.88
PMPCBO75439 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.56■□□□□ 0.88
PMPCBO75439 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PMPCBO75439 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PMPCBO75439 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 AL391422.3-201ENST00000603791 2761 ntBASIC20.56■□□□□ 0.88
PMPCBO75439 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PMPCBO75439 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PMPCBO75439 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.55■□□□□ 0.88
PMPCBO75439 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.55■□□□□ 0.88
PMPCBO75439 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 AC010980.2-201ENST00000587099 1412 ntBASIC20.55■□□□□ 0.88
PMPCBO75439 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PMPCBO75439 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC20.55■□□□□ 0.88
PMPCBO75439 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.55■□□□□ 0.88
PMPCBO75439 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PMPCBO75439 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.55■□□□□ 0.88
PMPCBO75439 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
PMPCBO75439 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 SMG8-203ENST00000578922 2178 ntBASIC20.55■□□□□ 0.88
PMPCBO75439 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PMPCBO75439 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PMPCBO75439 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms