Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH16O75309 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CDH16O75309 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 AC005332.7-201ENST00000614046 2005 ntBASIC20.44■□□□□ 0.86
CDH16O75309 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 AC116050.2-201ENST00000612102 1779 ntBASIC20.44■□□□□ 0.86
CDH16O75309 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH16O75309 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDH16O75309 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH16O75309 TNXA-203ENST00000507684 2038 ntBASIC20.44■□□□□ 0.86
CDH16O75309 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 KRT16P2-201ENST00000414673 1423 ntBASIC20.44■□□□□ 0.86
CDH16O75309 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH16O75309 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH16O75309 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH16O75309 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.43■□□□□ 0.86
CDH16O75309 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 AL691432.2-201ENST00000607222 2038 ntBASIC20.43■□□□□ 0.86
CDH16O75309 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.43■□□□□ 0.86
CDH16O75309 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 MIR572-201ENST00000384983 95 ntBASIC20.43■□□□□ 0.86
CDH16O75309 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.43■□□□□ 0.86
CDH16O75309 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 PBX2P1-201ENST00000493219 1291 ntBASIC20.43■□□□□ 0.86
CDH16O75309 AC008764.7-201ENST00000593779 1081 ntBASIC20.43■□□□□ 0.86
CDH16O75309 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH16O75309 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH16O75309 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.43■□□□□ 0.86
CDH16O75309 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.43■□□□□ 0.86
CDH16O75309 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH16O75309 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDH16O75309 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH16O75309 EDA-201ENST00000338901 1233 ntBASIC20.42■□□□□ 0.86
CDH16O75309 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH16O75309 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH16O75309 AC099791.1-201ENST00000416440 715 ntBASIC20.42■□□□□ 0.86
CDH16O75309 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH16O75309 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH16O75309 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH16O75309 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CDH16O75309 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH16O75309 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH16O75309 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH16O75309 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH16O75309 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDH16O75309 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH16O75309 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH16O75309 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
CDH16O75309 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CDH16O75309 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH16O75309 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH16O75309 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH16O75309 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH16O75309 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms