Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRAMEF11O60813 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 GABARAPL3-202ENST00000624044 1851 ntBASIC20.59■□□□□ 0.89
PRAMEF11O60813 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.59■□□□□ 0.89
PRAMEF11O60813 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRAMEF11O60813 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRAMEF11O60813 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.58■□□□□ 0.89
PRAMEF11O60813 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF11O60813 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF11O60813 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF11O60813 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRAMEF11O60813 DPP3P2-201ENST00000416030 1696 ntBASIC20.58■□□□□ 0.88
PRAMEF11O60813 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.58■□□□□ 0.88
PRAMEF11O60813 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRAMEF11O60813 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.57■□□□□ 0.88
PRAMEF11O60813 AL157384.1-201ENST00000445995 2473 ntBASIC20.56■□□□□ 0.88
PRAMEF11O60813 PTBP1P-201ENST00000554374 1601 ntBASIC20.56■□□□□ 0.88
PRAMEF11O60813 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.56■□□□□ 0.88
PRAMEF11O60813 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRAMEF11O60813 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
PRAMEF11O60813 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF11O60813 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF11O60813 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF11O60813 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF11O60813 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRAMEF11O60813 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF11O60813 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.55■□□□□ 0.88
PRAMEF11O60813 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PRAMEF11O60813 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms