Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VEGFDO43915 AC092720.2-201ENST00000602388 1665 ntBASIC19.91■□□□□ 0.78
VEGFDO43915 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VEGFDO43915 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.91■□□□□ 0.78
VEGFDO43915 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.91■□□□□ 0.78
VEGFDO43915 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.91■□□□□ 0.78
VEGFDO43915 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.91■□□□□ 0.78
VEGFDO43915 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.91■□□□□ 0.78
VEGFDO43915 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.91■□□□□ 0.78
VEGFDO43915 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VEGFDO43915 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
VEGFDO43915 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VEGFDO43915 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VEGFDO43915 AC023632.3-201ENST00000521633 145 ntBASIC19.9■□□□□ 0.78
VEGFDO43915 UNC93B5-201ENST00000530315 699 ntBASIC19.9■□□□□ 0.78
VEGFDO43915 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VEGFDO43915 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.9■□□□□ 0.78
VEGFDO43915 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.9■□□□□ 0.78
VEGFDO43915 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VEGFDO43915 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.9■□□□□ 0.78
VEGFDO43915 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VEGFDO43915 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VEGFDO43915 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
VEGFDO43915 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.9■□□□□ 0.78
VEGFDO43915 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.9■□□□□ 0.78
VEGFDO43915 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VEGFDO43915 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.9■□□□□ 0.78
VEGFDO43915 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.89■□□□□ 0.77
VEGFDO43915 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.89■□□□□ 0.77
VEGFDO43915 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.89■□□□□ 0.77
VEGFDO43915 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.89■□□□□ 0.77
VEGFDO43915 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
VEGFDO43915 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.89■□□□□ 0.77
VEGFDO43915 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
VEGFDO43915 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.89■□□□□ 0.77
VEGFDO43915 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.89■□□□□ 0.77
VEGFDO43915 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VEGFDO43915 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VEGFDO43915 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.88■□□□□ 0.77
VEGFDO43915 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
VEGFDO43915 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.88■□□□□ 0.77
VEGFDO43915 AC005829.2-201ENST00000571422 1056 ntBASIC19.88■□□□□ 0.77
VEGFDO43915 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VEGFDO43915 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.88■□□□□ 0.77
VEGFDO43915 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.88■□□□□ 0.77
VEGFDO43915 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
VEGFDO43915 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
VEGFDO43915 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.87■□□□□ 0.77
VEGFDO43915 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.87■□□□□ 0.77
VEGFDO43915 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VEGFDO43915 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms