Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.44■□□□□ 0.38
PHF1O43189 SLC7A5P1-201ENST00000568957 537 ntBASIC17.44■□□□□ 0.38
PHF1O43189 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHF1O43189 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PHF1O43189 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF1O43189 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
PHF1O43189 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PHF1O43189 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PHF1O43189 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.44■□□□□ 0.38
PHF1O43189 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PHF1O43189 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.43■□□□□ 0.38
PHF1O43189 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 AL158047.1-201ENST00000445918 881 ntBASIC17.43■□□□□ 0.38
PHF1O43189 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.43■□□□□ 0.38
PHF1O43189 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PHF1O43189 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PHF1O43189 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PHF1O43189 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.42■□□□□ 0.38
PHF1O43189 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.42■□□□□ 0.38
PHF1O43189 CNN2P6-201ENST00000439038 900 ntBASIC17.42■□□□□ 0.38
PHF1O43189 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
PHF1O43189 TERF1P5-201ENST00000477545 1207 ntBASIC17.42■□□□□ 0.38
PHF1O43189 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.42■□□□□ 0.38
PHF1O43189 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PHF1O43189 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.42■□□□□ 0.38
PHF1O43189 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PHF1O43189 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PHF1O43189 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PHF1O43189 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
PHF1O43189 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PHF1O43189 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PHF1O43189 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.41■□□□□ 0.38
PHF1O43189 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.41■□□□□ 0.38
PHF1O43189 RARRES2P4-201ENST00000514074 484 ntBASIC17.41■□□□□ 0.38
PHF1O43189 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PHF1O43189 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.41■□□□□ 0.38
PHF1O43189 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PHF1O43189 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PHF1O43189 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.4■□□□□ 0.38
PHF1O43189 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.4■□□□□ 0.38
PHF1O43189 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.4■□□□□ 0.38
PHF1O43189 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PHF1O43189 AC013268.1-206ENST00000638368 961 ntBASIC17.4■□□□□ 0.38
PHF1O43189 AC112229.1-201ENST00000639295 961 ntBASIC17.4■□□□□ 0.38
PHF1O43189 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms