Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MID1O15344 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MID1O15344 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.37■□□□□ 0.85
MID1O15344 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MID1O15344 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MID1O15344 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.37■□□□□ 0.85
MID1O15344 KRT8P36-201ENST00000489121 1440 ntBASIC20.36■□□□□ 0.85
MID1O15344 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.36■□□□□ 0.85
MID1O15344 FEM1AP4-201ENST00000443167 1987 ntBASIC20.36■□□□□ 0.85
MID1O15344 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
MID1O15344 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
MID1O15344 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
MID1O15344 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.36■□□□□ 0.85
MID1O15344 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.36■□□□□ 0.85
MID1O15344 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.36■□□□□ 0.85
MID1O15344 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
MID1O15344 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.36■□□□□ 0.85
MID1O15344 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.35■□□□□ 0.85
MID1O15344 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MID1O15344 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.35■□□□□ 0.85
MID1O15344 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
MID1O15344 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.35■□□□□ 0.85
MID1O15344 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.35■□□□□ 0.85
MID1O15344 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.35■□□□□ 0.85
MID1O15344 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.35■□□□□ 0.85
MID1O15344 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.35■□□□□ 0.85
MID1O15344 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MID1O15344 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.34■□□□□ 0.85
MID1O15344 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
MID1O15344 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.34■□□□□ 0.85
MID1O15344 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MID1O15344 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
MID1O15344 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MID1O15344 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.34■□□□□ 0.85
MID1O15344 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.34■□□□□ 0.85
MID1O15344 MTDHP1-201ENST00000605323 784 ntBASIC20.34■□□□□ 0.85
MID1O15344 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.34■□□□□ 0.85
MID1O15344 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.34■□□□□ 0.85
MID1O15344 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MID1O15344 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MID1O15344 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
MID1O15344 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MID1O15344 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.33■□□□□ 0.85
MID1O15344 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.33■□□□□ 0.85
MID1O15344 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.33■□□□□ 0.85
MID1O15344 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MID1O15344 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
MID1O15344 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
MID1O15344 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MID1O15344 AF106564.1-201ENST00000607058 2553 ntBASIC20.33■□□□□ 0.84
MID1O15344 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MID1O15344 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MID1O15344 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.32■□□□□ 0.84
MID1O15344 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
MID1O15344 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MID1O15344 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.32■□□□□ 0.84
MID1O15344 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.32■□□□□ 0.84
MID1O15344 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MID1O15344 AL023875.1-201ENST00000640777 796 ntBASIC20.32■□□□□ 0.84
MID1O15344 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms