Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA4O00483 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA4O00483 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NDUFA4O00483 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
NDUFA4O00483 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.55■□□□□ 0.08
NDUFA4O00483 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFA4O00483 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA4O00483 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFA4O00483 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA4O00483 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFA4O00483 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.55■□□□□ 0.08
NDUFA4O00483 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC15.55■□□□□ 0.08
NDUFA4O00483 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.55■□□□□ 0.08
NDUFA4O00483 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.55■□□□□ 0.08
NDUFA4O00483 AL589743.5-201ENST00000616611 1050 ntBASIC15.55■□□□□ 0.08
NDUFA4O00483 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.55■□□□□ 0.08
NDUFA4O00483 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFA4O00483 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NDUFA4O00483 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC15.55■□□□□ 0.08
NDUFA4O00483 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NDUFA4O00483 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 MIR663A-201ENST00000385250 93 ntBASIC15.54■□□□□ 0.08
NDUFA4O00483 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 AF201337.1-201ENST00000520239 748 ntBASIC15.54■□□□□ 0.08
NDUFA4O00483 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.54■□□□□ 0.08
NDUFA4O00483 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
NDUFA4O00483 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NDUFA4O00483 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NDUFA4O00483 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFA4O00483 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFA4O00483 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFA4O00483 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.53■□□□□ 0.08
NDUFA4O00483 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 RAP2CP1-201ENST00000605103 478 ntBASIC15.53■□□□□ 0.08
NDUFA4O00483 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC15.53■□□□□ 0.08
NDUFA4O00483 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.53■□□□□ 0.08
NDUFA4O00483 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NDUFA4O00483 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 AL162377.1-201ENST00000618844 1793 ntBASIC15.52■□□□□ 0.08
NDUFA4O00483 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.52■□□□□ 0.08
NDUFA4O00483 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 DPP3P2-201ENST00000416030 1696 ntBASIC15.52■□□□□ 0.08
NDUFA4O00483 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.52■□□□□ 0.08
NDUFA4O00483 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.52■□□□□ 0.08
NDUFA4O00483 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NDUFA4O00483 AC006970.2-201ENST00000450065 779 ntBASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms