Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.73■■□□□ 1.07
FOXN3O00409 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXN3O00409 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXN3O00409 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
FOXN3O00409 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.73■■□□□ 1.07
FOXN3O00409 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
FOXN3O00409 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
FOXN3O00409 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.73■■□□□ 1.07
FOXN3O00409 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.73■■□□□ 1.07
FOXN3O00409 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
FOXN3O00409 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 AC004911.1-201ENST00000416316 871 ntBASIC21.72■■□□□ 1.07
FOXN3O00409 AC007322.1-201ENST00000426983 750 ntBASIC21.72■■□□□ 1.07
FOXN3O00409 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.72■■□□□ 1.07
FOXN3O00409 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN3O00409 AC231657.2-201ENST00000624556 255 ntBASIC21.72■■□□□ 1.07
FOXN3O00409 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FOXN3O00409 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.72■■□□□ 1.07
FOXN3O00409 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.72■■□□□ 1.07
FOXN3O00409 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.72■■□□□ 1.07
FOXN3O00409 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
FOXN3O00409 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXN3O00409 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXN3O00409 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.71■■□□□ 1.07
FOXN3O00409 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXN3O00409 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.71■■□□□ 1.07
FOXN3O00409 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
FOXN3O00409 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
FOXN3O00409 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FOXN3O00409 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
FOXN3O00409 AFG3L1P-217ENST00000557444 2447 ntBASIC21.7■■□□□ 1.06
FOXN3O00409 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXN3O00409 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN3O00409 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN3O00409 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN3O00409 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 PGM5P4-201ENST00000421970 445 ntBASIC21.7■■□□□ 1.06
FOXN3O00409 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FOXN3O00409 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.7■■□□□ 1.06
FOXN3O00409 AC100791.3-201ENST00000617619 330 ntBASIC21.7■■□□□ 1.06
FOXN3O00409 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN3O00409 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
FOXN3O00409 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.7■■□□□ 1.06
FOXN3O00409 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.7■■□□□ 1.06
FOXN3O00409 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.69■■□□□ 1.06
FOXN3O00409 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
FOXN3O00409 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 MCRIP2P1-201ENST00000394346 511 ntBASIC21.69■■□□□ 1.06
FOXN3O00409 CYP2T1P-201ENST00000432607 1285 ntBASIC21.69■■□□□ 1.06
FOXN3O00409 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN3O00409 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN3O00409 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.69■■□□□ 1.06
FOXN3O00409 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN3O00409 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
FOXN3O00409 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.69■■□□□ 1.06
FOXN3O00409 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms