Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CLIC1O00299 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC1O00299 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CLIC1O00299 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC1O00299 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC1O00299 SLC7A5P1-201ENST00000568957 537 ntBASIC19.09■□□□□ 0.65
CLIC1O00299 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC1O00299 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.09■□□□□ 0.65
CLIC1O00299 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLIC1O00299 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.09■□□□□ 0.65
CLIC1O00299 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
CLIC1O00299 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC1O00299 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CLIC1O00299 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CLIC1O00299 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CLIC1O00299 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC1O00299 YBX1P1-201ENST00000445822 960 ntBASIC19.08■□□□□ 0.64
CLIC1O00299 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.08■□□□□ 0.64
CLIC1O00299 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.08■□□□□ 0.64
CLIC1O00299 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CLIC1O00299 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.08■□□□□ 0.64
CLIC1O00299 DPP3P2-201ENST00000416030 1696 ntBASIC19.08■□□□□ 0.64
CLIC1O00299 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CLIC1O00299 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.07■□□□□ 0.64
CLIC1O00299 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
CLIC1O00299 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
CLIC1O00299 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC1O00299 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC1O00299 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.07■□□□□ 0.64
CLIC1O00299 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC1O00299 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CLIC1O00299 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC1O00299 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC1O00299 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.07■□□□□ 0.64
CLIC1O00299 AC004854.2-201ENST00000608450 1441 ntBASIC19.07■□□□□ 0.64
CLIC1O00299 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CLIC1O00299 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.07■□□□□ 0.64
CLIC1O00299 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CLIC1O00299 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLIC1O00299 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CLIC1O00299 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC1O00299 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC1O00299 KRT18P14-201ENST00000534205 1250 ntBASIC19.06■□□□□ 0.64
CLIC1O00299 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.06■□□□□ 0.64
CLIC1O00299 FAM21FP-204ENST00000608637 956 ntBASIC19.06■□□□□ 0.64
CLIC1O00299 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CLIC1O00299 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CLIC1O00299 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.06■□□□□ 0.64
CLIC1O00299 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CLIC1O00299 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLIC1O00299 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.05■□□□□ 0.64
CLIC1O00299 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms