Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TAF4O00268 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.8■□□□□ 0.76
TAF4O00268 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TAF4O00268 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 POU5F1P4-201ENST00000413175 1085 ntBASIC19.79■□□□□ 0.76
TAF4O00268 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.79■□□□□ 0.76
TAF4O00268 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.79■□□□□ 0.76
TAF4O00268 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.79■□□□□ 0.76
TAF4O00268 AL049597.2-201ENST00000565575 961 ntBASIC19.79■□□□□ 0.76
TAF4O00268 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.79■□□□□ 0.76
TAF4O00268 SOX15-203ENST00000570788 1093 ntBASIC19.79■□□□□ 0.76
TAF4O00268 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.79■□□□□ 0.76
TAF4O00268 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TAF4O00268 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.79■□□□□ 0.76
TAF4O00268 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TAF4O00268 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TAF4O00268 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
TAF4O00268 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.78■□□□□ 0.76
TAF4O00268 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 AC079089.2-201ENST00000531211 1277 ntBASIC19.78■□□□□ 0.76
TAF4O00268 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 AC243732.1-201ENST00000612648 864 ntBASIC19.78■□□□□ 0.76
TAF4O00268 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.78■□□□□ 0.76
TAF4O00268 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.78■□□□□ 0.76
TAF4O00268 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.78■□□□□ 0.76
TAF4O00268 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TAF4O00268 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TAF4O00268 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.77■□□□□ 0.76
TAF4O00268 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TAF4O00268 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.77■□□□□ 0.76
TAF4O00268 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TAF4O00268 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TAF4O00268 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TAF4O00268 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TAF4O00268 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.76■□□□□ 0.75
TAF4O00268 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TAF4O00268 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.76■□□□□ 0.75
TAF4O00268 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.76■□□□□ 0.75
TAF4O00268 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.76■□□□□ 0.75
TAF4O00268 AC113410.3-201ENST00000623366 203 ntBASIC19.76■□□□□ 0.75
TAF4O00268 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TAF4O00268 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 AL391422.3-201ENST00000603791 2761 ntBASIC19.75■□□□□ 0.75
TAF4O00268 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TAF4O00268 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TAF4O00268 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 POM121L13P-201ENST00000422362 380 ntBASIC19.75■□□□□ 0.75
TAF4O00268 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TAF4O00268 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms