Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C4orf47A7E2U8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
C4orf47A7E2U8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
C4orf47A7E2U8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
C4orf47A7E2U8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 AC113347.1-201ENST00000413321 391 ntBASIC19.9■□□□□ 0.78
C4orf47A7E2U8 AL353807.1-201ENST00000427475 662 ntBASIC19.9■□□□□ 0.78
C4orf47A7E2U8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 LINC01568-207ENST00000641790 1380 ntBASIC19.9■□□□□ 0.78
C4orf47A7E2U8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
C4orf47A7E2U8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AP000525.1-201ENST00000608286 694 ntBASIC19.89■□□□□ 0.77
C4orf47A7E2U8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
C4orf47A7E2U8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.89■□□□□ 0.77
C4orf47A7E2U8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 AC079598.2-202ENST00000546624 1451 ntBASIC19.88■□□□□ 0.77
C4orf47A7E2U8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 PGM5P4-201ENST00000421970 445 ntBASIC19.88■□□□□ 0.77
C4orf47A7E2U8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 KRT16P5-201ENST00000455284 522 ntBASIC19.88■□□□□ 0.77
C4orf47A7E2U8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
C4orf47A7E2U8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 UNC93B2-201ENST00000285383 730 ntBASIC19.87■□□□□ 0.77
C4orf47A7E2U8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 MIR1238-201ENST00000408483 83 ntBASIC19.87■□□□□ 0.77
C4orf47A7E2U8 AL137013.1-201ENST00000432946 1228 ntBASIC19.87■□□□□ 0.77
C4orf47A7E2U8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.87■□□□□ 0.77
C4orf47A7E2U8 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms