Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.91■□□□□ 0.46
MBD3L3A6NE82 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 AL023875.1-201ENST00000640777 796 ntBASIC17.9■□□□□ 0.46
MBD3L3A6NE82 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
MBD3L3A6NE82 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
MBD3L3A6NE82 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.89■□□□□ 0.46
MBD3L3A6NE82 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MBD3L3A6NE82 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MBD3L3A6NE82 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 AC110285.5-201ENST00000611501 352 ntBASIC17.87■□□□□ 0.45
MBD3L3A6NE82 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 PLK5-205ENST00000642079 1969 ntBASIC17.87■□□□□ 0.45
MBD3L3A6NE82 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MBD3L3A6NE82 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 PRKY-204ENST00000533551 1019 ntBASIC17.86■□□□□ 0.45
MBD3L3A6NE82 Z99916.2-201ENST00000604037 246 ntBASIC17.86■□□□□ 0.45
MBD3L3A6NE82 AL121829.2-201ENST00000620908 328 ntBASIC17.86■□□□□ 0.45
MBD3L3A6NE82 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.86■□□□□ 0.45
MBD3L3A6NE82 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms