Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TCRBV3S1A0A5B6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TCRBV3S1A0A5B6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 DPP3P2-201ENST00000416030 1696 ntBASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TCRBV3S1A0A5B6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TCRBV3S1A0A5B6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 IGHV3-19-201ENST00000521488 291 ntBASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCRBV3S1A0A5B6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCRBV3S1A0A5B6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms