Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	TFB5	YDR079C-A	219 nt		3.25	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	PRE4	YFR050C	801 nt		3.25	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	SGF11	YPL047W	300 nt		3.25	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	UTP14	YML093W	2700 nt		3.25	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	JSN1	YJR091C	3276 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	HSC82	YMR186W	2118 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YPR203W	YPR203W	309 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	CFT2	YLR115W	2580 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	IPT1	YDR072C	1584 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	STU2	YLR045C	2667 nt		3.24	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YLR012C	YLR012C	300 nt		3.23	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	RPL25	YOL127W	429 nt		3.23	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YOR333C	YOR333C	417 nt		3.23	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	RTC6	YPL183W-A	282 nt		3.23	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	PAN3	YKL025C	2040 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YSP2	YDR326C	4317 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	RPA190	YOR341W	4995 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	PSO2	YMR137C	1986 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	DBP7	YKR024C	2229 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YEL073C	YEL073C	324 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	COX14	YML129C	213 nt		3.22	□□□□□ -1.89
TY4B-P	A0A0B7P3V8	YHR086W-A	YHR086W-A	162 nt		3.21	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YHR217C	YHR217C	462 nt		3.21	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	NOP53	YPL146C	1368 nt		3.21	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	GCN1	YGL195W	8019 nt		3.21	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	NTO1	YPR031W	2247 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	MET10	YFR030W	3108 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	INP52	YNL106C	3552 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	SRB8	YCR081W	4284 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	ASG1	YIL130W	2895 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	SPB1	YCL054W	2526 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	PLC1	YPL268W	2610 nt		3.2	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	PSK2	YOL045W	3306 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YIL082W-A	YIL082W-A	4497 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	PMP1	YCR024C-A	123 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YDR003W-A	YDR003W-A	123 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YGL063C-A	YGL063C-A	150 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	RPL22A	YLR061W	366 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YBR184W	YBR184W	1572 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	SSN2	YDR443C	4263 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	RLI1	YDR091C	1827 nt		3.19	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YJL070C	YJL070C	2667 nt		3.18	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	GEA1	YJR031C	4227 nt		3.18	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	AKR1	YDR264C	2295 nt		3.18	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	BOI1	YBL085W	2943 nt		3.17	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	SGD1	YLR336C	2700 nt		3.17	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	ECM12	YHR021W-A	456 nt		3.17	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	YCL001W-B	YCL001W-B	255 nt		3.17	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	EFR3	YMR212C	2349 nt		3.17	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	REC8	YPR007C	2043 nt		3.16	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	COS111	YBR203W	2775 nt		3.15	□□□□□ -1.9
TY4B-P	A0A0B7P3V8	SNT1	YCR033W	3681 nt		3.15	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	TIM11	YDR322C-A	291 nt		3.15	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YHL005C	YHL005C	393 nt		3.15	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	SSQ1	YLR369W	1974 nt		3.14	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	NFT1	YKR103W	3657 nt		3.14	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YEL043W	YEL043W	2871 nt		3.14	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YHR080C	YHR080C	4038 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	CAF120	YNL278W	3183 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	snR72	snR72	98 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	VMA9	YCL005W-A	222 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	BAS1	YKR099W	2436 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	SAP1	YER047C	2694 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	VPH1	YOR270C	2523 nt		3.13	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	MPH1	YIR002C	2982 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YDR209C	YDR209C	414 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YGL014C-A	YGL014C-A	162 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PNC1	YGL037C	651 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YKL165C-A	YKL165C-A	234 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	LSM7	YNL147W	348 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YOR218C	YOR218C	420 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	SIN3	YOL004W	4611 nt		3.12	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	HEH2	YDR458C	1992 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	POM152	YMR129W	4014 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)D	tK(UUU)D	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)G1	tK(UUU)G1	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)G2	tK(UUU)G2	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)K	tK(UUU)K	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)L	tK(UUU)L	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)O	tK(UUU)O	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	tK(UUU)P	tK(UUU)P	73 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	RPL33B	YOR234C	324 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	STE6	YKL209C	3873 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	DUG2	YBR281C	2637 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	INP2	YMR163C	2118 nt		3.11	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	FLO11	YIR019C	4104 nt		3.1	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YIR044C	YIR044C	186 nt		3.1	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	GRX8	YLR364W	330 nt		3.1	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YOR345C	YOR345C	351 nt		3.1	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	BUD4	YJR092W	4344 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YDL025W-A	YDL025W-A	105 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PAU10	YDR542W	363 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PAU11	YGL261C	363 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PAU4	YLR461W	363 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YMR122W-A	YMR122W-A	255 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	YOR314W-A	YOR314W-A	111 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	SUL1	YBR294W	2580 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	CIN8	YEL061C	3003 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PUF4	YGL014W	2667 nt		3.09	□□□□□ -1.91
TY4B-P	A0A0B7P3V8	PIG1	YLR273C	1947 nt		3.09	□□□□□ -1.92

Retrieved 100 of 7,029 protein–RNA pairs in 34.6 ms