Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 AC005229.4-201ENST00000610085 2198 ntBASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV25A0A0B4J276 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV25A0A0B4J276 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 HLA-B-256ENST00000639848 1089 ntBASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 FP700111.2-201ENST00000619190 1892 ntBASIC15.23■□□□□ 0.03
TRAV25A0A0B4J276 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 AC007375.3-201ENST00000600936 2314 ntBASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV25A0A0B4J276 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 KRT18P6-201ENST00000555540 1265 ntBASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 AC098934.4-201ENST00000564127 592 ntBASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 AC060766.5-201ENST00000590539 871 ntBASIC15.21■□□□□ 0.03
TRAV25A0A0B4J276 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms