Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 BEST3-203ENST00000331471 1506 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 SNORA70G-201ENST00000383923 142 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 NINJ2-202ENST00000397265 793 ntAPPRIS ALT2 TSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 MIR1272-201ENST00000408106 129 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 SMIM12-201ENST00000417239 684 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC004006.1-201ENST00000434994 377 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 RPL15P1-201ENST00000439981 600 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 ASS1P11-201ENST00000441309 1216 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AL445189.2-201ENST00000447543 259 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AL603839.3-201ENST00000450713 605 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 LINC00967-202ENST00000517725 259 ntTSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 FRG2HP-201ENST00000568807 832 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 RN7SL203P-201ENST00000579600 296 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC005379.1-201ENST00000585647 328 ntTSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC020658.4-201ENST00000613987 684 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 AC079316.2-201ENST00000623545 1375 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 FLJ42393-201ENST00000623801 2270 ntBASIC7.65□□□□□ -1.18
SNX18Q96RF0 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.19
SNX18Q96RF0 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
SNX18Q96RF0 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SNX18Q96RF0 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC7.65□□□□□ -1.19
SNX18Q96RF0 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.65□□□□□ -1.19
SNX18Q96RF0 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
SNX18Q96RF0 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 SIRPD-202ENST00000381623 1958 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 PATE2-201ENST00000358524 1657 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 PAAF1-202ENST00000376384 1500 ntTSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 CHI3L2-204ENST00000466741 1518 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 RN7SKP127-201ENST00000410443 354 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 RN7SKP264-201ENST00000411080 289 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 AL122008.2-201ENST00000412915 570 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 AL035658.1-201ENST00000415054 357 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 PIGCP2-201ENST00000433617 835 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AL590609.1-201ENST00000442164 328 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC069213.3-201ENST00000454858 474 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 ASS1P8-201ENST00000504437 647 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 ELL2P2-201ENST00000515135 694 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 RNA5SP101-201ENST00000517036 108 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 BRIX1P1-201ENST00000521785 908 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 HP-207ENST00000562526 685 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC7.64□□□□□ -1.19
SNX18Q96RF0 SLC25A6P5-202ENST00000602729 1038 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
SNX18Q96RF0 AC026333.4-201ENST00000613543 544 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC7.64□□□□□ -1.19
SNX18Q96RF0 Metazoa_SRP.108-201ENST00000621610 300 ntBASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms