Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TBL1YP1-201ENST00000440297 1026 ntBASIC8.78□□□□□ -1
MTHFRP42898 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.78□□□□□ -1
MTHFRP42898 RPS2P25-201ENST00000467247 580 ntBASIC8.78□□□□□ -1
MTHFRP42898 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.78□□□□□ -1
MTHFRP42898 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.78□□□□□ -1
MTHFRP42898 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 ST3GAL4-219ENST00000534457 987 ntTSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC8.78□□□□□ -1
MTHFRP42898 AC243312.1-201ENST00000570582 275 ntBASIC8.78□□□□□ -1
MTHFRP42898 MIR3714-201ENST00000579507 65 ntBASIC8.78□□□□□ -1
MTHFRP42898 AC091147.1-201ENST00000583290 510 ntBASIC8.78□□□□□ -1
MTHFRP42898 RN7SL25P-201ENST00000583862 260 ntBASIC8.78□□□□□ -1
MTHFRP42898 RPL35AP25-201ENST00000584631 330 ntBASIC8.78□□□□□ -1
MTHFRP42898 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 AC016876.3-201ENST00000610459 426 ntBASIC8.78□□□□□ -1
MTHFRP42898 LINC02028-221ENST00000622169 621 ntTSL 5 BASIC8.78□□□□□ -1
MTHFRP42898 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 BRDT-205ENST00000399546 3357 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
MTHFRP42898 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 RSPO2-203ENST00000517939 2487 ntTSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 MAPK10-312ENST00000641391 2488 ntAPPRIS P2 BASIC8.78□□□□□ -1
MTHFRP42898 MAPK10-378ENST00000642009 2463 ntAPPRIS P2 BASIC8.78□□□□□ -1
MTHFRP42898 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC8.78□□□□□ -1
MTHFRP42898 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
MTHFRP42898 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 WISP3-202ENST00000361714 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC8.78□□□□□ -1
MTHFRP42898 GULP1-202ENST00000409580 3544 ntAPPRIS P3 TSL 2 BASIC8.77□□□□□ -1
MTHFRP42898 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1
MTHFRP42898 XRCC6P1-201ENST00000420392 1805 ntBASIC8.77□□□□□ -1
MTHFRP42898 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
MTHFRP42898 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 AC068389.3-201ENST00000373384 529 ntTSL 4 BASIC8.77□□□□□ -1.01
MTHFRP42898 FAM107B-202ENST00000378458 1284 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 SNORA57.2-201ENST00000391265 128 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 RN7SKP89-201ENST00000410774 242 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC8.77□□□□□ -1.01
MTHFRP42898 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC090044.1-201ENST00000423193 497 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 AP001342.1-201ENST00000423389 525 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC8.77□□□□□ -1.01
MTHFRP42898 AL035660.2-201ENST00000461248 556 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC010368.1-201ENST00000510160 456 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 AC097460.2-201ENST00000511857 741 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC8.77□□□□□ -1.01
MTHFRP42898 RN7SL785P-201ENST00000578437 253 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 AC006238.1-201ENST00000609787 534 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 SLFN13-210ENST00000534689 3058 ntTSL 2 BASIC8.77□□□□□ -1.01
MTHFRP42898 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
MTHFRP42898 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 IARS2P1-201ENST00000508226 3173 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 DDX11L16-201ENST00000507418 1306 ntBASIC8.77□□□□□ -1.01
MTHFRP42898 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MTHFRP42898 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 GLULP5-201ENST00000547831 1390 ntBASIC8.76□□□□□ -1.01
MTHFRP42898 AC135731.2-201ENST00000603029 2098 ntBASIC8.76□□□□□ -1.01
MTHFRP42898 GPM6A-221ENST00000515090 1500 ntTSL 2 BASIC8.76□□□□□ -1.01
MTHFRP42898 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
MTHFRP42898 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC8.76□□□□□ -1.01
MTHFRP42898 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MTHFRP42898 RN7SKP93-201ENST00000363838 309 ntBASIC8.76□□□□□ -1.01
MTHFRP42898 VTRNA1-2-201ENST00000365241 89 ntBASIC8.76□□□□□ -1.01
MTHFRP42898 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
MTHFRP42898 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.76□□□□□ -1.01
MTHFRP42898 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC8.76□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms