Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 IFITM4P-207ENST00000441380 420 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC133965.1-201ENST00000452984 354 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL031727.1-201ENST00000457263 455 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 AF186996.1-201ENST00000466578 1015 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 OR9A3P-202ENST00000485185 878 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 ACTG1P20-201ENST00000486001 468 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 RPS3P7-201ENST00000488662 726 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC106868.1-201ENST00000505272 992 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 MTCO3P42-201ENST00000509488 518 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC073848.1-201ENST00000514339 457 ntTSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 MTCO3P39-201ENST00000514812 518 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 TTN-AS1-218ENST00000586452 828 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL022345.3-201ENST00000611406 228 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.67□□□□□ -1.18
SNX18Q96RF0 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 SCYL2-211ENST00000635101 3948 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 NHSL2-208ENST00000639939 3402 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AP000941.1-201ENST00000530198 1388 ntTSL 3 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC7.67□□□□□ -1.18
SNX18Q96RF0 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 MYO6-207ENST00000615563 4026 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ZNF45-204ENST00000589703 2409 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SNX18Q96RF0 AL589642.1-201ENST00000430787 2582 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TRIM53BP-201ENST00000532912 1720 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TMCC1-AS1-204ENST00000605830 3496 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 ACER3-212ENST00000532485 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 UBQLNL-201ENST00000380184 2313 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AL590240.2-201ENST00000413370 894 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 AL513302.1-201ENST00000415679 428 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC103563.4-201ENST00000454384 368 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 RNU6-775P-201ENST00000459318 96 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 RN7SL659P-201ENST00000483093 299 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 OR7E159P-201ENST00000553761 298 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC009630.2-202ENST00000578500 884 ntTSL 3 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AL513548.2-201ENST00000602994 1207 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC234791.1-201ENST00000620830 1203 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 MIR7113-201ENST00000621222 59 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 AL109653.2-201ENST00000625029 1065 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC091953.4-201ENST00000625179 341 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AL137782.1-201ENST00000563635 4128 ntTSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 MAPK10-290ENST00000641237 2826 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AC019117.2-202ENST00000635900 1476 ntTSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 HCFC2P1-201ENST00000392864 1592 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SNX18Q96RF0 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 ZNF840P-201ENST00000504759 1996 ntBASIC7.66□□□□□ -1.18
SNX18Q96RF0 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 ELF5-201ENST00000257832 2321 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SNX18Q96RF0 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.65□□□□□ -1.18
SNX18Q96RF0 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SNX18Q96RF0 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms