Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ASB8-211ENST00000539528 839 ntTSL 3 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC006927.1-201ENST00000544818 498 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 CRADD-211ENST00000552983 839 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 LINC00520-204ENST00000556417 778 ntTSL 3 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC137527.1-201ENST00000565839 1261 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 RPL23AP86-201ENST00000573796 541 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC063950.1-202ENST00000600133 568 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AL161729.2-201ENST00000605700 456 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC215522.1-201ENST00000615488 446 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AC013489.3-201ENST00000623274 517 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 ITPRIPL1-201ENST00000361124 4295 ntBASIC7.7□□□□□ -1.18
SNX18Q96RF0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
SNX18Q96RF0 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
SNX18Q96RF0 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 KLRC1-203ENST00000408006 1559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 MIR146B-201ENST00000365699 73 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 TMED5-201ENST00000370280 750 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 NIP7P3-201ENST00000404319 515 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 CYCSP5-201ENST00000415043 297 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC106017.1-202ENST00000424109 428 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 RPL36P2-201ENST00000426026 315 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC007952.3-202ENST00000435028 428 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 FTH1P4-201ENST00000480365 553 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 NPM1P50-201ENST00000532878 867 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC138466.2-201ENST00000540993 304 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC113554.1-201ENST00000606284 490 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC104794.4-201ENST00000607181 446 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC093726.2-201ENST00000609134 679 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 MIR6732-201ENST00000619365 60 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC002044.3-201ENST00000623314 541 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC011472.5-201ENST00000624079 508 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC010223.1-201ENST00000625092 279 ntBASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC7.69□□□□□ -1.18
SNX18Q96RF0 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
SNX18Q96RF0 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 TCF4-241ENST00000568740 2628 ntTSL 5 BASIC7.68□□□□□ -1.18
SNX18Q96RF0 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SNX18Q96RF0 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms