Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC092569.1-201ENST00000455192 258 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.89□□□□□ -0.99
MTHFRP42898 OR7E15P-201ENST00000533484 967 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC8.89□□□□□ -0.99
MTHFRP42898 CCDC58P1-201ENST00000578567 430 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 AC011523.1-201ENST00000598079 392 ntTSL 3 BASIC8.89□□□□□ -0.99
MTHFRP42898 AC093063.1-201ENST00000599317 363 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 YTHDF2P1-201ENST00000604759 1271 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 AL451054.3-201ENST00000611115 776 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 AC016999.2-201ENST00000614692 556 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 CDKL5-209ENST00000635828 3823 ntTSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
MTHFRP42898 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 CCDC144B-201ENST00000285176 4310 ntBASIC8.89□□□□□ -0.99
MTHFRP42898 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
MTHFRP42898 BPNT1-205ENST00000469520 2737 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
MTHFRP42898 FAM193A-210ENST00000545951 3987 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 SORL1-204ENST00000525532 3836 ntTSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 EEF1A1P10-201ENST00000475365 1390 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 PID1-201ENST00000354069 839 ntTSL 3 BASIC8.88□□□□□ -0.99
MTHFRP42898 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 RNA5SP209-201ENST00000411237 97 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 YBX1P8-201ENST00000421881 943 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 PRPS1P2-201ENST00000430496 937 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 AC073475.1-201ENST00000434012 592 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 AL021939.1-201ENST00000441868 886 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 AC245047.6-201ENST00000445444 617 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 RN7SL272P-201ENST00000487762 289 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 AC114964.1-201ENST00000502306 1111 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 HSPE1P10-201ENST00000508631 558 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 POLB-211ENST00000521492 786 ntTSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.88□□□□□ -0.99
MTHFRP42898 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.88□□□□□ -0.99
MTHFRP42898 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 AC013452.1-201ENST00000560630 598 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 LINC01002-216ENST00000632351 572 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 CCNG2-205ENST00000509972 1549 ntTSL 2 BASIC8.88□□□□□ -0.99
MTHFRP42898 MYOCOS-204ENST00000637642 1549 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 AMPH-202ENST00000356264 3418 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.88□□□□□ -0.99
MTHFRP42898 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
MTHFRP42898 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
MTHFRP42898 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC8.87□□□□□ -0.99
MTHFRP42898 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 FCGR3B-201ENST00000294800 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 OTOA-204ENST00000388958 3610 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 NPM1-204ENST00000517671 1338 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 STMND1-203ENST00000536551 1322 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
MTHFRP42898 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
MTHFRP42898 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 CUBNP1-201ENST00000412710 1790 ntBASIC8.87□□□□□ -0.99
MTHFRP42898 EXOSC9-211ENST00000512454 1543 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
MTHFRP42898 EXOSC2-203ENST00000372352 1957 ntTSL 5 BASIC8.87□□□□□ -0.99
MTHFRP42898 Z97985.1-201ENST00000332270 946 ntBASIC8.87□□□□□ -0.99
MTHFRP42898 SNORA71D-201ENST00000363484 134 ntBASIC8.87□□□□□ -0.99
MTHFRP42898 AC093392.1-201ENST00000366280 340 ntBASIC8.87□□□□□ -0.99
MTHFRP42898 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms