Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ARFGEF1Q9Y6D6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 UPK3BP1-201ENST00000428678 509 ntBASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 C2orf69P3-201ENST00000565542 1120 ntBASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 MYC-208ENST00000641036 567 ntBASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 AC010542.4-201ENST00000563151 1910 ntBASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
ARFGEF1Q9Y6D6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 KRT16P1-201ENST00000399124 1418 ntBASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 NIFKP9-201ENST00000419265 221 ntBASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 AL137013.1-201ENST00000432946 1228 ntBASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC25.05■■□□□ 1.6
ARFGEF1Q9Y6D6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 AC092053.2-201ENST00000640557 1818 ntBASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ARFGEF1Q9Y6D6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 CRYGFP-201ENST00000418459 633 ntBASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC25.03■■□□□ 1.6
ARFGEF1Q9Y6D6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 AC127496.7-201ENST00000625110 1798 ntBASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 AC124283.5-201ENST00000624661 1809 ntBASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC25.02■■□□□ 1.6
ARFGEF1Q9Y6D6 C9orf163-202ENST00000624034 2573 ntBASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 AC027702.1-201ENST00000563810 1770 ntBASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC25.01■■□□□ 1.59
ARFGEF1Q9Y6D6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms