Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 UPK3BP1-201ENST00000428678 509 ntBASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 AC010203.1-204ENST00000548782 407 ntBASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.09■■□□□ 1.29
PTCH2Q9Y6C5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 TPM4P1-201ENST00000436100 807 ntBASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 AC006011.2-201ENST00000621313 1158 ntBASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCH2Q9Y6C5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 AP002982.1-201ENST00000492365 877 ntBASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 NMU-205ENST00000511469 756 ntTSL 3 BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCH2Q9Y6C5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 AC124283.5-201ENST00000624661 1809 ntBASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 METTL23-204ENST00000586752 904 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCH2Q9Y6C5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCH2Q9Y6C5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCH2Q9Y6C5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AC116562.2-201ENST00000507042 360 ntBASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AL358472.4-201ENST00000633140 710 ntBASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms