Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 AC087623.3-201ENST00000607047 1098 ntBASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.43■□□□□ 0.7
AP4B1Q9Y6B7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
AP4B1Q9Y6B7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 AC026471.1-201ENST00000564629 3026 ntBASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 AC034268.1-201ENST00000441047 882 ntBASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
AP4B1Q9Y6B7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 CCDC92B-201ENST00000575506 885 ntBASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 TERF1P2-201ENST00000583350 1212 ntBASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 AP004607.7-201ENST00000527152 1677 ntBASIC19.4■□□□□ 0.7
AP4B1Q9Y6B7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 AC121338.2-201ENST00000622535 1744 ntBASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
AP4B1Q9Y6B7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
AP4B1Q9Y6B7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms