Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA9Q9Y5G4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 Z99916.2-201ENST00000604037 246 ntBASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA9Q9Y5G4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 AC233263.1-201ENST00000578059 224 ntBASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA9Q9Y5G4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 AC244015.2-201ENST00000616358 1861 ntBASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA9Q9Y5G4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 SNORA78-201ENST00000459373 127 ntBASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA9Q9Y5G4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHGA9Q9Y5G4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms