Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 CROCCP5-201ENST00000436658 830 ntBASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LSM4Q9Y4Z0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 KRT18P11-201ENST00000435214 1283 ntBASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 AC006970.2-201ENST00000450065 779 ntBASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.22■□□□□ 0.19
LSM4Q9Y4Z0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 NCF1B-203ENST00000435988 1254 ntBASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AL109923.1-201ENST00000618799 583 ntBASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LSM4Q9Y4Z0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.21■□□□□ 0.18
LSM4Q9Y4Z0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LSM4Q9Y4Z0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 AC005224.4-201ENST00000583262 1652 ntBASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
LSM4Q9Y4Z0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 TCF3P1-201ENST00000423021 1937 ntBASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 AC011767.1-201ENST00000617410 1153 ntBASIC16.19■□□□□ 0.18
LSM4Q9Y4Z0 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms