Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 SMG8-203ENST00000578922 2178 ntBASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.46■□□□□ 0.39
MRPS28Q9Y2Q9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MRPS28Q9Y2Q9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.46■□□□□ 0.38
MRPS28Q9Y2Q9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MRPS28Q9Y2Q9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.44■□□□□ 0.38
MRPS28Q9Y2Q9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L2-201ENST00000561772 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L6-201ENST00000626483 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L1-201ENST00000627662 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L8-201ENST00000629013 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L3-201ENST00000630187 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L7-201ENST00000630678 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 DUX4L5-201ENST00000630834 1275 ntBASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MRPS28Q9Y2Q9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 IRS3P-201ENST00000223076 1006 ntBASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 AC142381.2-201ENST00000566120 298 ntBASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MRPS28Q9Y2Q9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms